Variant report

Variant rs13009390
Chromosome Location chr2:114654016-114654017
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114648600-114657800 Weak transcription Gastric stomach
2 chr2:114648600-114667600 Weak transcription Lung lung
3 chr2:114649200-114661200 Weak transcription Fetal Muscle Trunk muscle
4 chr2:114649200-114673200 Weak transcription Placenta Placenta
5 chr2:114649400-114655200 Weak transcription H1 Cell Line embryonic stem cell
6 chr2:114649600-114661000 Weak transcription Fetal Muscle Leg muscle
7 chr2:114649800-114655600 Enhancers Small Intestine intestine
8 chr2:114650000-114654400 Weak transcription Fetal Intestine Small intestine
9 chr2:114650000-114655600 Enhancers Skeletal Muscle Female skeletal muscle
10 chr2:114650200-114654200 Genic enhancers HSMM muscle
11 chr2:114650200-114654600 Genic enhancers Dnd41 blood
12 chr2:114650200-114658400 Enhancers Adipose Nuclei Adipose
13 chr2:114650200-114658400 Enhancers Stomach Mucosa stomach
14 chr2:114650200-114661000 Weak transcription Right Ventricle heart
15 chr2:114650400-114654400 Weak transcription Fetal Lung lung
16 chr2:114650400-114655400 Weak transcription Fetal Intestine Large intestine
17 chr2:114650600-114654200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr2:114651200-114654200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
19 chr2:114651200-114655800 Enhancers Brain Hippocampus Middle brain
20 chr2:114651400-114654600 Enhancers Sigmoid Colon Sigmoid Colon
21 chr2:114651600-114658000 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr2:114652000-114654200 Weak transcription Stomach Smooth Muscle stomach
23 chr2:114652000-114654400 Enhancers Thymus Thymus
24 chr2:114652000-114656000 Enhancers NHLF lung
25 chr2:114652000-114658000 Weak transcription Pancreas Pancrea
26 chr2:114652000-114667600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr2:114652000-114667600 Weak transcription Esophagus oesophagus
28 chr2:114652200-114654200 Genic enhancers Muscle Satellite Cultured Cells --
29 chr2:114652200-114654600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr2:114652200-114658000 Enhancers Duodenum Mucosa Duodenum
31 chr2:114652200-114700600 Weak transcription Fetal Brain Male brain
32 chr2:114652400-114654200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
33 chr2:114652400-114654200 Weak transcription Colon Smooth Muscle Colon
34 chr2:114652400-114654600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr2:114652400-114654600 Weak transcription Rectal Smooth Muscle rectum
36 chr2:114652400-114655200 Enhancers Primary monocytes fromperipheralblood blood
37 chr2:114652400-114655400 Enhancers HUES6 Cell Line embryonic stem cell
38 chr2:114652400-114655400 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr2:114652400-114655400 Weak transcription Brain Inferior Temporal Lobe brain
40 chr2:114652400-114655800 Enhancers HUES48 Cell Line embryonic stem cell
41 chr2:114652400-114656400 Weak transcription Brain Germinal Matrix brain
42 chr2:114652400-114656800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr2:114652400-114657200 Enhancers HUVEC blood vessel
44 chr2:114652400-114657800 Weak transcription Aorta Aorta
45 chr2:114652400-114657800 Weak transcription Colonic Mucosa Colon
46 chr2:114652400-114660400 Weak transcription Fetal Kidney kidney
47 chr2:114652400-114686000 Weak transcription Placenta Amnion Placenta Amnion
48 chr2:114652600-114654200 Genic enhancers Primary hematopoietic stem cells blood
49 chr2:114652600-114655400 Enhancers HepG2 liver
50 chr2:114652800-114655400 Enhancers Primary T cells fromperipheralblood blood

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