Variant report

Variant	rs13079656
Chromosome Location	chr3:18093080-18093081
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs11922099	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12493277	1.00[JPT][hapmap]
rs13062364	0.92[ASN][1000 genomes]
rs13073245	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13075905	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13076043	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13080006	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13082583	0.92[ASN][1000 genomes]
rs13088044	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13092967	0.81[ASN][1000 genomes]
rs13096272	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13100478	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs34100396	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34253553	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34467492	0.92[ASN][1000 genomes]
rs34500886	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34593250	0.88[ASN][1000 genomes]
rs34683501	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34706490	0.81[ASN][1000 genomes]
rs34805505	0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34879943	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35047986	0.92[ASN][1000 genomes]
rs35048968	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs35119242	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35380191	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35413369	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35525126	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35965516	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4908951	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4908953	0.90[ASN][1000 genomes]
rs4908997	0.92[ASN][1000 genomes]
rs4909002	0.90[ASN][1000 genomes]
rs4909004	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4909006	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs66837099	0.89[ASN][1000 genomes]
rs66943997	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67051048	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67130673	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67279963	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67552090	0.97[ASN][1000 genomes]
rs6794553	0.84[ASN][1000 genomes]
rs73043943	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7375132	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7426391	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7427336	0.97[ASN][1000 genomes]
rs7429971	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7433704	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9310541	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9838434	0.97[ASN][1000 genomes]
rs9838477	0.92[ASN][1000 genomes]
rs9849870	0.95[ASN][1000 genomes]
rs9875977	0.97[ASN][1000 genomes]
rs9876738	0.97[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18086000-18096000	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr3:18086800-18113400	Weak transcription	Fetal Thymus	thymus
3	chr3:18088400-18095600	Weak transcription	Primary hematopoietic stem cells	blood
4	chr3:18092800-18093400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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