Variant report
| Variant | rs34593250 |
|---|---|
| Chromosome Location | chr3:18073037-18073038 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr3:18032310..18035084-chr3:18071634..18073958,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:50)
| rs_ID | r2[population] |
|---|---|
| rs11922099 | 0.88[ASN][1000 genomes] |
| rs13062364 | 0.95[ASN][1000 genomes] |
| rs13073245 | 0.95[ASN][1000 genomes] |
| rs13075905 | 0.85[ASN][1000 genomes] |
| rs13076043 | 0.85[ASN][1000 genomes] |
| rs13079656 | 0.88[ASN][1000 genomes] |
| rs13080006 | 0.88[ASN][1000 genomes] |
| rs13082583 | 0.85[ASN][1000 genomes] |
| rs13088044 | 0.90[ASN][1000 genomes] |
| rs13096272 | 0.88[ASN][1000 genomes] |
| rs13100478 | 0.83[ASN][1000 genomes] |
| rs34100396 | 0.95[ASN][1000 genomes] |
| rs34253553 | 0.95[ASN][1000 genomes] |
| rs34467492 | 0.95[ASN][1000 genomes] |
| rs34500886 | 0.88[ASN][1000 genomes] |
| rs34683501 | 0.93[ASN][1000 genomes] |
| rs34805505 | 0.95[ASN][1000 genomes] |
| rs34879943 | 0.95[ASN][1000 genomes] |
| rs35047986 | 0.85[ASN][1000 genomes] |
| rs35048968 | 0.83[ASN][1000 genomes] |
| rs35119242 | 0.90[ASN][1000 genomes] |
| rs35380191 | 0.85[ASN][1000 genomes] |
| rs35413369 | 0.88[ASN][1000 genomes] |
| rs35525126 | 0.95[ASN][1000 genomes] |
| rs35965516 | 0.90[ASN][1000 genomes] |
| rs4908951 | 0.90[ASN][1000 genomes] |
| rs4908953 | 0.93[ASN][1000 genomes] |
| rs4908997 | 0.95[ASN][1000 genomes] |
| rs4909002 | 0.93[ASN][1000 genomes] |
| rs4909004 | 0.86[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs4909006 | 0.83[ASN][1000 genomes] |
| rs66837099 | 0.83[ASN][1000 genomes] |
| rs66943997 | 0.88[ASN][1000 genomes] |
| rs67051048 | 0.88[ASN][1000 genomes] |
| rs67130673 | 0.90[ASN][1000 genomes] |
| rs67279963 | 0.95[ASN][1000 genomes] |
| rs67552090 | 0.85[ASN][1000 genomes] |
| rs73042045 | 0.81[ASN][1000 genomes] |
| rs73043943 | 0.95[ASN][1000 genomes] |
| rs7375132 | 0.86[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs7426391 | 0.95[ASN][1000 genomes] |
| rs7427336 | 0.90[ASN][1000 genomes] |
| rs7429971 | 0.90[ASN][1000 genomes] |
| rs7433704 | 0.95[ASN][1000 genomes] |
| rs9310541 | 0.88[ASN][1000 genomes] |
| rs9838434 | 0.85[ASN][1000 genomes] |
| rs9838477 | 0.81[ASN][1000 genomes] |
| rs9849870 | 0.83[ASN][1000 genomes] |
| rs9875977 | 0.85[ASN][1000 genomes] |
| rs9876738 | 0.85[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:18046200-18076600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 2 | chr3:18055000-18088000 | Weak transcription | Primary hematopoietic stem cells | blood |
