Variant report

Variant	rs73042045
Chromosome Location	chr3:18013915-18013916
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:18005293..18007407-chr3:18011037..18014028,3	K562	blood:

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs13062364	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13067391	1.00[AFR][1000 genomes]
rs13071249	1.00[AFR][1000 genomes]
rs13072195	1.00[AFR][1000 genomes]
rs13073245	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs13082583	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13088044	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs13092745	1.00[AFR][1000 genomes]
rs13100478	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34100396	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs34253553	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs34467492	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34495945	1.00[AFR][1000 genomes]
rs34593250	0.81[ASN][1000 genomes]
rs34598243	1.00[AFR][1000 genomes]
rs34683501	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs34805505	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs34879943	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs35047986	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35048968	0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs35119242	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs35525126	0.86[ASN][1000 genomes]
rs35600741	1.00[AFR][1000 genomes]
rs35703302	1.00[AFR][1000 genomes]
rs35965516	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs36093138	1.00[AFR][1000 genomes]
rs4688906	1.00[AFR][1000 genomes]
rs4908945	1.00[AFR][1000 genomes]
rs4908951	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4908953	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4908997	0.86[ASN][1000 genomes]
rs4909002	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4909004	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4909006	0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs4909008	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs66569729	1.00[AFR][1000 genomes]
rs66837099	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67130673	0.81[ASN][1000 genomes]
rs67279963	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs67552090	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs68000706	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73030648	1.00[AFR][1000 genomes]
rs73043943	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs7375132	1.00[AFR][1000 genomes]
rs7426391	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs7427336	0.81[ASN][1000 genomes]
rs7429971	0.81[ASN][1000 genomes]
rs7433704	0.86[ASN][1000 genomes]
rs9838434	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9838477	0.90[EUR][1000 genomes]
rs9875977	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9876738	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18009800-18014400	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr3:18009800-18014600	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr3:18009800-18014600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr3:18009800-18019000	Weak transcription	Fetal Thymus	thymus
5	chr3:18010000-18014600	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr3:18010800-18014400	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr3:18012200-18014400	Weak transcription	Hela-S3	cervix
8	chr3:18013000-18014800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr3:18013000-18015000	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr3:18013200-18014200	Weak transcription	Primary hematopoietic stem cells	blood
11	chr3:18013200-18014600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr3:18013400-18015600	Enhancers	Colon Smooth Muscle	Colon
13	chr3:18013600-18014000	Flanking Active TSS	Dnd41	blood
14	chr3:18013600-18014400	Enhancers	Thymus	Thymus
15	chr3:18013600-18014600	Enhancers	Rectal Smooth Muscle	rectum
16	chr3:18013600-18015000	Enhancers	Fetal Brain Male	brain
17	chr3:18013600-18015400	Enhancers	Fetal Lung	lung
18	chr3:18013600-18015600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr3:18013600-18015600	Enhancers	Fetal Kidney	kidney
20	chr3:18013600-18015800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr3:18013800-18014000	Enhancers	Primary T cells from cord blood	blood
22	chr3:18013800-18015000	Enhancers	Sigmoid Colon	Sigmoid Colon
23	chr3:18013800-18015200	Enhancers	Fetal Stomach	stomach
24	chr3:18013800-18015400	Enhancers	Fetal Brain Female	brain

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