Variant report

Variant	rs67130673
Chromosome Location	chr3:18089338-18089339
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs11922099	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13062364	0.95[ASN][1000 genomes]
rs13073245	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13075905	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13076043	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13079656	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13080006	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13082583	0.95[ASN][1000 genomes]
rs13088044	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13096272	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13100478	0.92[ASN][1000 genomes]
rs17273292	1.00[AFR][1000 genomes]
rs34100396	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34253553	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34467492	0.95[ASN][1000 genomes]
rs34500886	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34593250	0.90[ASN][1000 genomes]
rs34683501	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34805505	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34879943	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35047986	0.95[ASN][1000 genomes]
rs35048968	0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35119242	1.00[AFR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35380191	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35413369	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35525126	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35891824	1.00[AFR][1000 genomes]
rs35965516	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4908951	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4908953	0.92[ASN][1000 genomes]
rs4908997	0.95[ASN][1000 genomes]
rs4909002	0.92[ASN][1000 genomes]
rs4909004	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4909006	0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs66837099	0.92[ASN][1000 genomes]
rs66943997	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67051048	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67279963	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs67552090	0.95[ASN][1000 genomes]
rs6794553	0.82[ASN][1000 genomes]
rs68075942	1.00[AFR][1000 genomes]
rs73042045	0.81[ASN][1000 genomes]
rs73043943	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7375132	0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7426391	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7427336	1.00[ASN][1000 genomes]
rs7429971	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7433704	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9310541	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9838434	0.95[ASN][1000 genomes]
rs9838477	0.90[ASN][1000 genomes]
rs9849870	0.92[ASN][1000 genomes]
rs9875977	0.95[ASN][1000 genomes]
rs9876738	0.95[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18086000-18092800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr3:18086000-18096000	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr3:18086200-18090600	Weak transcription	Colon Smooth Muscle	Colon
4	chr3:18086800-18113400	Weak transcription	Fetal Thymus	thymus
5	chr3:18088400-18095600	Weak transcription	Primary hematopoietic stem cells	blood
6	chr3:18089000-18090400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr3:18089200-18089600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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