The 2.0 version of rSNPBase

Variant report

Variant rs13084037
Chromosome Location chr3:49214066-49214067
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49209800-49215000 Weak transcription H9 Cell Line embryonic stem cell
2 chr3:49210800-49214600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:49211000-49215200 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr3:49211200-49214200 Weak transcription A549 lung
5 chr3:49211200-49214600 Weak transcription Muscle Satellite Cultured Cells --
6 chr3:49211200-49218800 Weak transcription Fetal Kidney kidney
7 chr3:49211200-49224600 Weak transcription Primary hematopoietic stem cells blood
8 chr3:49211400-49214400 Weak transcription Duodenum Mucosa Duodenum
9 chr3:49211400-49214400 Genic enhancers Left Ventricle heart
10 chr3:49211400-49215000 Weak transcription NHDF-Ad bronchial
11 chr3:49211400-49216000 Weak transcription Brain Substantia Nigra brain
12 chr3:49211400-49217600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr3:49211600-49214200 Genic enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:49211600-49214400 Strong transcription Esophagus oesophagus
15 chr3:49211600-49214800 Strong transcription Placenta Amnion Placenta Amnion
16 chr3:49211600-49215200 Genic enhancers Adipose Nuclei Adipose
17 chr3:49211800-49214400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr3:49211800-49214800 Weak transcription K562 blood
19 chr3:49211800-49215000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr3:49211800-49215000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr3:49211800-49215000 Genic enhancers Right Ventricle heart
22 chr3:49211800-49216000 Genic enhancers Fetal Muscle Trunk muscle
23 chr3:49211800-49216200 Genic enhancers Fetal Muscle Leg muscle
24 chr3:49211800-49216600 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr3:49212000-49214200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr3:49212000-49214200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr3:49212000-49214400 Genic enhancers Skeletal Muscle Male skeletal muscle
28 chr3:49212000-49215200 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr3:49212000-49215400 Weak transcription Brain Angular Gyrus brain
30 chr3:49212000-49216200 Weak transcription Osteobl bone
31 chr3:49212200-49214200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr3:49212200-49214200 Strong transcription Colon Smooth Muscle Colon
33 chr3:49212200-49214400 Weak transcription Brain Cingulate Gyrus brain
34 chr3:49212200-49214600 Strong transcription Placenta Placenta
35 chr3:49212200-49214800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr3:49212200-49218800 Weak transcription HepG2 liver
37 chr3:49212400-49214800 Strong transcription Fetal Lung lung
38 chr3:49212400-49215200 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr3:49212400-49215400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr3:49212400-49215600 Strong transcription Lung lung
41 chr3:49212600-49214200 Strong transcription Brain Inferior Temporal Lobe brain
42 chr3:49212600-49214600 Weak transcription Fetal Brain Male brain
43 chr3:49212600-49216400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr3:49212800-49214400 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr3:49212800-49214400 Strong transcription Rectal Smooth Muscle rectum
46 chr3:49212800-49215200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr3:49212800-49215600 Strong transcription Aorta Aorta
48 chr3:49212800-49215800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
49 chr3:49212800-49216200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr3:49212800-49217000 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015