The 2.0 version of rSNPBase

Variant report

Variant rs62259943
Chromosome Location chr3:49425167-49425168
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49396800-49438800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:49399000-49448000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:49406000-49445200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr3:49411000-49434600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr3:49413200-49425400 Weak transcription Brain Hippocampus Middle brain
6 chr3:49413200-49425600 Weak transcription Hela-S3 cervix
7 chr3:49413200-49431800 Weak transcription Duodenum Mucosa Duodenum
8 chr3:49413200-49432000 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr3:49413200-49432000 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr3:49413200-49432000 Weak transcription Fetal Kidney kidney
11 chr3:49413200-49433200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr3:49413200-49435000 Weak transcription Brain Angular Gyrus brain
13 chr3:49413200-49441400 Weak transcription Aorta Aorta
14 chr3:49413200-49443000 Weak transcription Brain Cingulate Gyrus brain
15 chr3:49413200-49447400 Weak transcription H9 Cell Line embryonic stem cell
16 chr3:49413400-49425400 Weak transcription Thymus Thymus
17 chr3:49413400-49425400 Weak transcription Dnd41 blood
18 chr3:49413400-49425600 Weak transcription Fetal Intestine Large intestine
19 chr3:49413400-49431800 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr3:49413400-49433600 Weak transcription Brain Germinal Matrix brain
21 chr3:49413400-49439000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr3:49413600-49430600 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr3:49413600-49432000 Weak transcription Fetal Lung lung
24 chr3:49413600-49433200 Weak transcription Colonic Mucosa Colon
25 chr3:49413600-49441000 Weak transcription Fetal Brain Female brain
26 chr3:49413800-49425600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr3:49415800-49425400 Weak transcription Fetal Thymus thymus
28 chr3:49416200-49425400 Weak transcription Spleen Spleen
29 chr3:49416200-49430400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr3:49416200-49431800 Weak transcription Placenta Amnion Placenta Amnion
31 chr3:49416200-49433200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr3:49416200-49435200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr3:49416400-49425400 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr3:49416400-49425400 Weak transcription Fetal Intestine Small intestine
35 chr3:49416400-49425400 Weak transcription Fetal Muscle Trunk muscle
36 chr3:49416400-49425800 Weak transcription NHLF lung
37 chr3:49416400-49429400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr3:49416400-49432200 Weak transcription Placenta Placenta
39 chr3:49416800-49425600 Weak transcription NH-A brain
40 chr3:49417200-49425600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr3:49417600-49425600 Weak transcription Right Ventricle heart
42 chr3:49417600-49425800 Weak transcription NHEK skin
43 chr3:49417800-49425200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr3:49417800-49425400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr3:49417800-49425400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:49417800-49425400 Weak transcription Gastric stomach
47 chr3:49417800-49425400 Weak transcription HSMM muscle
48 chr3:49417800-49425600 Weak transcription Stomach Smooth Muscle stomach
49 chr3:49417800-49425800 Weak transcription HMEC breast
50 chr3:49417800-49437800 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015