Variant report

Variant	rs9871024
Chromosome Location	chr3:49554241-49554242
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:49508269..49511222-chr3:49551619..49554342,2	K562	blood:
2	chr3:49552836..49554741-chr3:49566217..49568088,2	K562	blood:
3	chr3:49553490..49555280-chr3:49710706..49713654,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000164062	Chromatin interaction

Extended variants
information (count: 127 )
Associated
traits (count: 34 )

rSNPs within LD-proxies of this variant (count:126)

rs_ID	r²[population]
rs1009051	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10154992	1.00[ASN][1000 genomes]
rs10155014	0.85[EUR][1000 genomes]
rs10452032	0.82[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.97[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs1078341	0.82[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.95[YRI][hapmap];1.00[ASN][1000 genomes]
rs10865956	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1106620	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11130186	1.00[ASN][1000 genomes]
rs11130187	1.00[ASN][1000 genomes]
rs11130190	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130204	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11130207	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11130208	0.91[ASW][hapmap];1.00[CHD][hapmap];1.00[LWK][hapmap];0.95[MKK][hapmap];0.95[YRI][hapmap];0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11130217	0.82[ASW][hapmap];1.00[CHD][hapmap];0.88[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs11709734	1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs11710434	1.00[ASN][1000 genomes]
rs11715060	0.81[EUR][1000 genomes]
rs11719762	1.00[CEU][hapmap]
rs11720542	1.00[ASN][1000 genomes]
rs11720657	0.86[CEU][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11720705	1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs11928090	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12583	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12637313	1.00[CHD][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs12715437	0.82[ASW][hapmap];1.00[CHD][hapmap];0.88[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs13096474	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap];0.85[EUR][1000 genomes]
rs13096480	0.87[YRI][hapmap];1.00[ASN][1000 genomes]
rs13322887	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1352889	1.00[CHD][hapmap];0.84[LWK][hapmap];0.95[MKK][hapmap]
rs1463728	1.00[ASN][1000 genomes]
rs1464569	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes]
rs1491983	0.82[ASW][hapmap];1.00[CHD][hapmap];0.86[LWK][hapmap];0.95[MKK][hapmap]
rs1491985	1.00[ASN][1000 genomes]
rs1532204	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1586827	0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs1982861	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2029591	0.91[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs2131108	0.82[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs2140270	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2177268	1.00[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2312462	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2329021	0.82[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs2329025	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3020779	0.82[YRI][hapmap];1.00[ASN][1000 genomes]
rs3448	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34890793	1.00[CHD][hapmap];0.83[LWK][hapmap];0.92[MKK][hapmap]
rs3866330	1.00[CEU][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3870339	0.95[CEU][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3870341	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3905330	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4052546	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4241405	0.91[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4241407	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4384984	1.00[ASN][1000 genomes]
rs4855833	1.00[CHD][hapmap];0.84[LWK][hapmap];0.95[MKK][hapmap]
rs4855837	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4855838	0.83[AFR][1000 genomes]
rs4855845	0.90[YRI][hapmap];1.00[ASN][1000 genomes]
rs4855846	0.82[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs4855848	1.00[ASN][1000 genomes]
rs4855849	1.00[ASN][1000 genomes]
rs4855853	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4855858	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4855869	0.87[EUR][1000 genomes]
rs4855882	1.00[CHD][hapmap]
rs4855885	1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs4955414	1.00[ASN][1000 genomes]
rs4955430	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.84[MEX][hapmap];0.97[TSI][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]
rs4955443	1.00[ASN][1000 genomes]
rs56049603	0.83[EUR][1000 genomes]
rs56127630	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56324858	0.84[EUR][1000 genomes]
rs57273516	0.91[EUR][1000 genomes]
rs62259933	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259943	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259944	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259947	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62261183	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62261249	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62262672	1.00[ASN][1000 genomes]
rs62262673	1.00[ASN][1000 genomes]
rs62262675	1.00[ASN][1000 genomes]
rs6446275	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6446285	1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs6446286	1.00[ASN][1000 genomes]
rs6774202	1.00[CHD][hapmap];0.84[LWK][hapmap];0.94[MKK][hapmap]
rs6778080	1.00[ASN][1000 genomes]
rs6783003	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6785045	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6797299	0.94[YRI][hapmap];0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6805609	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6809204	1.00[ASN][1000 genomes]
rs72934271	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073004	0.80[EUR][1000 genomes]
rs73088137	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7355800	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7374731	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7613491	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7619016	1.00[ASN][1000 genomes]
rs7619789	0.91[EUR][1000 genomes]
rs7620024	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs7622786	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7625857	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7626076	1.00[ASN][1000 genomes]
rs7638750	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7644148	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7647973	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7648995	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7651372	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7653505	1.00[CHD][hapmap];0.84[MKK][hapmap]
rs8897	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[YRI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs940045	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes]
rs9654010	0.88[EUR][1000 genomes]
rs974495	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap]
rs9757181	1.00[CEU][hapmap]
rs9809237	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9817807	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9824435	1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs9830730	1.00[ASN][1000 genomes]
rs9842132	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9860055	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9860285	1.00[ASN][1000 genomes]
rs9861027	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9862534	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9881860	1.00[ASN][1000 genomes]
rs9883000	0.82[ASW][hapmap];1.00[CHD][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.91[YRI][hapmap];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834687	chr3:49448632-49631788	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases

mRNA abundance (count:34)

SNP	Gene	Cis/trans	Tissue	Source
rs9871024	AMT	cis	Thyroid	GTEx
rs9871024	WDR6	cis	Muscle Skeletal	GTEx
rs9871024	DALRD3	cis	parietal	SCAN
rs9871024	ZNF589	cis	parietal	SCAN
rs9871024	NME6	cis	cerebellum	SCAN
rs9871024	NICN1	cis	Thyroid	GTEx
rs9871024	AMT	cis	Artery Tibial	GTEx
rs9871024	QRICH1	cis	cerebellum	SCAN
rs9871024	NICN1-AS1	cis	Thyroid	GTEx
rs9871024	AMT	cis	lymphoblastoid	seeQTL
rs9871024	DALRD3	cis	cerebellum	SCAN
rs9871024	AMT	cis	Skin Sun Exposed Lower leg	GTEx
rs9871024	AMT	cis	cerebellum	SCAN
rs9871024	AMT	cis	Nerve Tibial	GTEx
rs9871024	WDR6	cis	Esophagus Muscularis	GTEx
rs9871024	P4HTM	cis	parietal	SCAN
rs9871024	AMT	cis	Esophagus Mucosa	GTEx
rs9871024	AMT	cis	Whole Blood	GTEx
rs9871024	AMT	cis	Adipose Subcutaneous	GTEx
rs9871024	WDR6	cis	cerebellum	SCAN
rs9871024	GNL3	cis	cerebellum	SCAN
rs9871024	AMT	cis	Esophagus Muscularis	GTEx
rs9871024	AMT	cis	Artery Aorta	GTEx
rs9871024	AMT	cis	Muscle Skeletal	GTEx
rs9871024	AMT	cis	parietal	SCAN
rs9871024	WDR6	cis	parietal	SCAN
rs9871024	AMT	cis	lung	GTEx
rs9871024	AMT	Cis_1M	lymphoblastoid	RTeQTL
rs9871024	NICN1	cis	cerebellum	SCAN
rs9871024	SEMA3G	cis	cerebellum	SCAN
rs9871024	LZTFL1	cis	cerebellum	SCAN
rs9871024	GMPPB	cis	parietal	SCAN
rs9871024	WDR6	cis	Nerve Tibial	GTEx
rs9871024	GPX1	cis	parietal	SCAN

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49529600-49568600	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr3:49538000-49554800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr3:49539600-49568600	Weak transcription	Small Intestine	intestine
4	chr3:49546200-49577000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr3:49546400-49554400	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr3:49546600-49556200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr3:49546600-49556400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr3:49547000-49572000	Weak transcription	Fetal Brain Male	brain
9	chr3:49547400-49562200	Strong transcription	Primary T cells from cord blood	blood
10	chr3:49547600-49555400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
11	chr3:49547600-49556000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr3:49547600-49556200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr3:49547600-49564200	Strong transcription	Fetal Intestine Small	intestine
14	chr3:49547800-49554800	Strong transcription	Fetal Muscle Leg	muscle
15	chr3:49547800-49555000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr3:49547800-49555800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr3:49547800-49556200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr3:49547800-49556200	Strong transcription	Primary T helper cells fromperipheralblood	blood
19	chr3:49547800-49556400	Strong transcription	Primary B cells from peripheral blood	blood
20	chr3:49547800-49557200	Strong transcription	HUES64 Cell Line	embryonic stem cell
21	chr3:49547800-49557800	Strong transcription	Rectal Mucosa Donor 29	rectum
22	chr3:49547800-49558000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
23	chr3:49547800-49559000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr3:49547800-49560400	Strong transcription	Fetal Thymus	thymus
25	chr3:49547800-49562800	Strong transcription	Fetal Stomach	stomach
26	chr3:49548000-49556200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr3:49548000-49556400	Strong transcription	HUES48 Cell Line	embryonic stem cell
28	chr3:49548000-49562800	Strong transcription	Fetal Intestine Large	intestine
29	chr3:49548200-49556400	Strong transcription	Fetal Muscle Trunk	muscle
30	chr3:49548400-49577400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
31	chr3:49549200-49554800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr3:49549200-49554800	Weak transcription	Fetal Lung	lung
33	chr3:49549200-49568800	Weak transcription	Osteobl	bone
34	chr3:49549400-49554800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
35	chr3:49549400-49554800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr3:49549800-49557400	Strong transcription	Stomach Smooth Muscle	stomach
37	chr3:49550000-49554400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr3:49550000-49556600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
39	chr3:49550200-49558000	Strong transcription	Duodenum Mucosa	Duodenum
40	chr3:49550400-49555400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
41	chr3:49550400-49556400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr3:49550600-49558600	Strong transcription	Sigmoid Colon	Sigmoid Colon
43	chr3:49550800-49554800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr3:49550800-49555400	Strong transcription	Lung	lung
45	chr3:49550800-49556600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr3:49550800-49568400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
47	chr3:49551200-49554600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
48	chr3:49551200-49554800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
49	chr3:49551200-49555200	Weak transcription	Ovary	ovary
50	chr3:49551200-49556200	Weak transcription	Brain Substantia Nigra	brain

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