Variant report

Variant	rs6446275
Chromosome Location	chr3:49466871-49466872
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:338)
CpG islands
(count:61)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:338 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr3:49466201-49467399	NB4	blood:	n/a	n/a
2	ZEB1	chr3:49466345-49466944	GM12878	blood:	n/a	n/a
3	ZBTB7A	chr3:49466299-49467015	ECC-1	luminal epithelium:	n/a	n/a
4	JUND	chr3:49466607-49467320	K562	blood:	n/a	n/a
5	POLR2A	chr3:49466361-49467756	K562	blood:	n/a	n/a
6	PML	chr3:49466556-49467113	K562	blood:	n/a	n/a
7	SIX5	chr3:49466504-49466930	GM12878	blood:	n/a	chr3:49466761-49466770 chr3:49466759-49466768
8	TCF7L2	chr3:49466609-49467368	HCT-116	colon:	n/a	n/a
9	POLR2A	chr3:49466181-49467471	GM12878	blood:	n/a	n/a
10	TAF1	chr3:49466668-49467032	Hela-S3	cervix:	n/a	n/a
11	POLR2A	chr3:49466459-49467014	HL-60	blood:	n/a	n/a
12	GABPA	chr3:49466476-49466971	HepG2	liver:	n/a	n/a
13	POLR2A	chr3:49466484-49467381	GM19193	blood:	n/a	n/a
14	TAF1	chr3:49466457-49466990	H1-neurons	neurons:	n/a	n/a
15	CREB1	chr3:49466443-49467411	H1-hESC	embryonic stem cell:	n/a	n/a
16	POLR2A	chr3:49466800-49466933	HepG2	liver:	n/a	n/a
17	CHD2	chr3:49466643-49467330	H1-hESC	embryonic stem cell:	n/a	n/a
18	GTF3C2	chr3:49466695-49467567	Hela-S3	cervix:	n/a	n/a
19	BCL3	chr3:49466678-49467140	A549	lung:	n/a	n/a
20	ZBTB33	chr3:49466676-49467011	A549	lung:	n/a	n/a
21	E2F4	chr3:49466694-49467381	MCF10A-Er-Src	breast:	n/a	chr3:49466795-49466804 chr3:49467173-49467182
22	CHD1	chr3:49466267-49467456	GM12878	blood:	n/a	n/a
23	YY1	chr3:49466524-49466958	K562	blood:	n/a	n/a
24	POLR2A	chr3:49466471-49467425	HCT-116	colon:	n/a	n/a
25	ZNF143	chr3:49466331-49467005	K562	blood:	n/a	chr3:49466759-49466777 chr3:49466761-49466770 chr3:49466759-49466768
26	MYBL2	chr3:49466484-49467515	HepG2	liver:	n/a	n/a
27	POLR2A	chr3:49466354-49467377	HepG2	liver:	n/a	n/a
28	IRF1	chr3:49466567-49467505	K562	blood:	n/a	chr3:49466795-49466804 chr3:49467173-49467182
29	POLR2A	chr3:49466485-49467500	U87	brain:	n/a	n/a
30	ETS1	chr3:49466456-49467019	K562	blood:	n/a	chr3:49466758-49466771 chr3:49466764-49466773
31	ELF1	chr3:49466550-49466959	K562	blood:	n/a	n/a
32	ATF2	chr3:49466563-49466955	GM12878	blood:	n/a	n/a
33	SIX5	chr3:49466567-49466990	H1-hESC	embryonic stem cell:	n/a	chr3:49466761-49466770 chr3:49466759-49466768
34	SIX5	chr3:49466553-49466933	K562	blood:	n/a	chr3:49466761-49466770 chr3:49466759-49466768
35	ETS1	chr3:49466503-49467047	GM12878	blood:	n/a	chr3:49466758-49466771 chr3:49466764-49466773
36	ELF1	chr3:49466484-49467142	SK-N-SH	brain:	n/a	n/a
37	RELA	chr3:49466359-49467498	GM19099	blood:	n/a	n/a
38	TAF1	chr3:49466526-49467334	H1-hESC	embryonic stem cell:	n/a	n/a
39	POLR2A	chr3:49466511-49467467	GM12878	blood:	n/a	n/a
40	SIX5	chr3:49466570-49466948	K562	blood:	n/a	chr3:49466761-49466770 chr3:49466759-49466768
41	SIN3AK20	chr3:49466509-49466987	H1-hESC	embryonic stem cell:	n/a	n/a
42	POLR2A	chr3:49466467-49467371	GM15510	blood:	n/a	n/a
43	TBP	chr3:49466632-49467400	HepG2	liver:	n/a	n/a
44	ATF2	chr3:49466406-49467441	GM12878	blood:	n/a	n/a
45	MAX	chr3:49466347-49467367	Hela-S3	cervix:	n/a	n/a
46	SPI1	chr3:49466646-49466894	GM12891	blood:	n/a	n/a
47	POLR2A	chr3:49466510-49467386	Hela-S3	cervix:	n/a	n/a
48	POLR2A	chr3:49466518-49467624	MCF10A-Er-Src	breast:	n/a	n/a
49	CHD2	chr3:49466637-49467070	K562	blood:	n/a	n/a
50	ARID3A	chr3:49466764-49467557	K562	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:49466861-49466911	HCF	heart:	n/a
2	chr3:49466861-49466911	Jurkat	blood:	n/a
3	chr3:49466861-49466911	T-47D	breast:	n/a
4	chr3:49466861-49466911	Hela-S3	cervix:	n/a
5	chr3:49466861-49466911	HAEpiC	amniotic membrane:	n/a
6	chr3:49466861-49466911	MCF10A-Er-Src	breast:	n/a
7	chr3:49466861-49466911	ECC-1	luminal epithelium:	n/a
8	chr3:49466861-49466911	AG09319	gingival:	n/a
9	chr3:49466861-49466911	CMK	blood:	n/a
10	chr3:49466861-49466911	GM12891	blood:	n/a
11	chr3:49466861-49466911	MCF-7	breast:	n/a
12	chr3:49466861-49466911	AG04450	lung:	fetal
13	chr3:49466861-49466911	AG10803	skin:	n/a
14	chr3:49466861-49466911	HEEpiC	esophagus:	n/a
15	chr3:49466861-49466911	NH-A	brain:	n/a
16	chr3:49466861-49466911	HCPEpiC	choroid plexus:	n/a
17	chr3:49466861-49466911	SK-N-MC	brain:	n/a
18	chr3:49466861-49466911	HIPEpiC	eye:	n/a
19	chr3:49466861-49466911	HNPCEpiC	eye:	n/a
20	chr3:49466861-49466911	HL-60	blood:	n/a
21	chr3:49466861-49466911	NT2-D1	testis:	n/a
22	chr3:49466861-49466911	GM12892	blood:	n/a
23	chr3:49466861-49466911	HMEC	breast:	n/a
24	chr3:49466861-49466911	PrEC	prostate:	n/a
25	chr3:49466861-49466911	AoSMC	blood vessel:	n/a
26	chr3:49466861-49466911	A549	lung:	n/a
27	chr3:49466861-49466911	SK-N-SH	brain:	n/a
28	chr3:49466861-49466911	HEK293	kidney:	embryo
29	chr3:49466861-49466911	HRE	kidney:	n/a
30	chr3:49466861-49466911	PFSK-1	brain:	n/a
31	chr3:49466861-49466911	HCT-116	colon:	n/a
32	chr3:49466861-49466911	BE2_C	brain:	n/a
33	chr3:49466861-49466911	GM12878	blood:	n/a
34	chr3:49466861-49466911	LNCaP	prostate:	n/a
35	chr3:49466861-49466911	Caco-2	colon:	n/a
36	chr3:49466861-49466911	ovcar-3	ovarian:	n/a
37	chr3:49466861-49466911	GM06990	blood:	n/a
38	chr3:49466861-49466911	IMR90	lung:	fetal
39	chr3:49466861-49466911	SK-N-SH_RA	brain:	n/a
40	chr3:49466861-49466911	Hepatocyte	liver:	n/a
41	chr3:49466861-49466911	HRCEpiC	kidney:	n/a
42	chr3:49466861-49466911	RPTEC	kidney:	n/a
43	chr3:49466861-49466911	HepG2	liver:	n/a
44	chr3:49466861-49466911	HPAEpiC	pulmonary alveolar:	n/a
45	chr3:49466861-49466911	NHDF-neo	bronchial:	n/a
46	chr3:49466861-49466911	SKMC	muscle:	n/a
47	chr3:49466861-49466911	PANC-1	pancreas:	n/a
48	chr3:49466861-49466911	U87	brain:	n/a
49	chr3:49466861-49466911	HCM	heart:	n/a
50	chr3:49466861-49466911	BJ	skin:	n/a

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:49449931..49451765-chr3:49466713..49468674,2	MCF-7	breast:
2	chr3:49376764..49379634-chr3:49465144..49467494,3	MCF-7	breast:
3	chr3:49375307..49378756-chr3:49465334..49469314,4	K562	blood:
4	chr3:49463180..49464811-chr3:49464830..49467753,3	K562	blood:
5	chr3:49131454..49133143-chr3:49466292..49468330,2	K562	blood:
6	chr3:49457686..49462880-chr3:49464384..49468098,7	MCF-7	breast:
7	chr18:9827951..9828913-chr3:49466778..49467706,2	Hela-S3	cervix:
8	chr3:49460720..49464051-chr3:49464777..49467713,3	MCF-7	breast:
9	chr3:49447469..49451415-chr3:49463621..49468909,12	K562	blood:

No data

Variant related genes	Relation type
NICN1	TF binding region
NICN1	CpG island
ENSG00000235261	Chromatin interaction
ENSG00000145020	Chromatin interaction
ENSG00000145029	Chromatin interaction
ENSG00000198218	Chromatin interaction
ENSG00000145022	Chromatin interaction
ENSG00000067560	Chromatin interaction
ENSG00000114316	Chromatin interaction

Extended variants
information (count: 145 )
Associated
traits (count: 17 )

rSNPs within LD-proxies of this variant (count:143)

rs_ID	r²[population]
rs1009051	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10154992	1.00[ASN][1000 genomes]
rs10155014	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10452032	1.00[ASN][1000 genomes]
rs1078341	1.00[ASN][1000 genomes]
rs10865956	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1106620	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11130183	1.00[ASN][1000 genomes]
rs11130186	1.00[ASN][1000 genomes]
rs11130187	1.00[ASN][1000 genomes]
rs11130190	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130207	1.00[ASN][1000 genomes]
rs11130208	1.00[ASN][1000 genomes]
rs11130217	1.00[ASN][1000 genomes]
rs11709734	1.00[ASN][1000 genomes]
rs11710434	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11715060	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11719762	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11720542	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11720657	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11720705	1.00[ASN][1000 genomes]
rs11923032	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11928090	0.86[EUR][1000 genomes]
rs12583	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12637313	1.00[ASN][1000 genomes]
rs12715437	1.00[ASN][1000 genomes]
rs13084037	1.00[ASN][1000 genomes]
rs13096474	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13096480	1.00[ASN][1000 genomes]
rs13322887	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1463728	1.00[ASN][1000 genomes]
rs1464569	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1491985	1.00[ASN][1000 genomes]
rs1532204	1.00[ASN][1000 genomes]
rs1586827	1.00[ASN][1000 genomes]
rs1982861	0.86[EUR][1000 genomes]
rs2029591	1.00[ASN][1000 genomes]
rs2082923	1.00[ASN][1000 genomes]
rs2099526	1.00[ASN][1000 genomes]
rs2131108	1.00[ASN][1000 genomes]
rs2140270	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2177268	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2312462	0.86[EUR][1000 genomes]
rs2329021	1.00[ASN][1000 genomes]
rs2329025	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3020779	1.00[ASN][1000 genomes]
rs3448	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3866330	0.86[EUR][1000 genomes]
rs3870339	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3870341	0.86[EUR][1000 genomes]
rs3905330	0.89[EUR][1000 genomes]
rs4052546	0.87[EUR][1000 genomes]
rs4241405	1.00[ASN][1000 genomes]
rs4241407	0.86[EUR][1000 genomes]
rs4384984	1.00[ASN][1000 genomes]
rs4855837	0.84[EUR][1000 genomes]
rs4855845	1.00[ASN][1000 genomes]
rs4855846	1.00[ASN][1000 genomes]
rs4855848	1.00[ASN][1000 genomes]
rs4855849	1.00[ASN][1000 genomes]
rs4855853	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4855858	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4855869	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4855885	1.00[ASN][1000 genomes]
rs4955413	0.82[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs4955414	1.00[ASN][1000 genomes]
rs4955421	1.00[ASN][1000 genomes]
rs4955423	1.00[ASN][1000 genomes]
rs4955424	0.86[EUR][1000 genomes]
rs4955425	0.85[EUR][1000 genomes]
rs4955427	1.00[ASN][1000 genomes]
rs4955430	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4955439	1.00[ASN][1000 genomes]
rs4955443	1.00[ASN][1000 genomes]
rs56127630	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57273516	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62259933	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259943	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259944	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259947	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62261183	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62261249	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62262672	1.00[ASN][1000 genomes]
rs62262673	1.00[ASN][1000 genomes]
rs62262675	1.00[ASN][1000 genomes]
rs6446256	1.00[ASN][1000 genomes]
rs6446257	1.00[ASN][1000 genomes]
rs6446262	0.89[EUR][1000 genomes]
rs6446285	1.00[ASN][1000 genomes]
rs6446286	1.00[ASN][1000 genomes]
rs6769744	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6769821	1.00[ASN][1000 genomes]
rs6775069	0.87[EUR][1000 genomes]
rs6778080	1.00[ASN][1000 genomes]
rs6783003	0.91[EUR][1000 genomes]
rs6784203	0.86[EUR][1000 genomes]
rs6785045	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6796147	0.85[EUR][1000 genomes]
rs6797299	1.00[ASN][1000 genomes]
rs6805609	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6808036	1.00[ASN][1000 genomes]
rs6809204	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72934271	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073004	0.80[EUR][1000 genomes]
rs73088137	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7355800	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7374731	0.89[EUR][1000 genomes]
rs7429661	1.00[ASN][1000 genomes]
rs7613491	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7617480	1.00[ASN][1000 genomes]
rs7619016	1.00[ASN][1000 genomes]
rs7619789	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7620024	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7622786	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7625857	0.84[EUR][1000 genomes]
rs7626076	1.00[ASN][1000 genomes]
rs7631586	1.00[ASN][1000 genomes]
rs7638750	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7644148	0.89[EUR][1000 genomes]
rs7647973	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7648995	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7651372	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8897	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs940045	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9586	1.00[ASN][1000 genomes]
rs9654010	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs974495	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9809237	0.89[EUR][1000 genomes]
rs9812360	0.82[EUR][1000 genomes]
rs9817807	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9824435	1.00[ASN][1000 genomes]
rs9830730	1.00[ASN][1000 genomes]
rs9831648	1.00[ASN][1000 genomes]
rs9834003	1.00[ASN][1000 genomes]
rs9842132	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9860055	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9860285	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9861027	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9862534	0.86[EUR][1000 genomes]
rs9867285	1.00[ASN][1000 genomes]
rs9871024	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9881860	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9883000	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834687	chr3:49448632-49631788	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv963482	chr3:49459177-49486938	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

mRNA abundance (count:17)

SNP	Gene	Cis/trans	Tissue	Source
rs6446275	AMT	cis	Esophagus Muscularis	GTEx
rs6446275	AMT	cis	Thyroid	GTEx
rs6446275	WDR6	cis	Nerve Tibial	GTEx
rs6446275	AMT	Cis_1M	lymphoblastoid	RTeQTL
rs6446275	AMT	cis	Skin Sun Exposed Lower leg	GTEx
rs6446275	AMT	cis	Adipose Subcutaneous	GTEx
rs6446275	WDR6	cis	Esophagus Muscularis	GTEx
rs6446275	NICN1-AS1	cis	Thyroid	GTEx
rs6446275	AMT	cis	Nerve Tibial	GTEx
rs6446275	AMT	cis	Artery Aorta	GTEx
rs6446275	AMT	cis	lung	GTEx
rs6446275	WDR6	cis	Muscle Skeletal	GTEx
rs6446275	AMT	cis	Whole Blood	GTEx
rs6446275	AMT	cis	Esophagus Mucosa	GTEx
rs6446275	AMT	cis	Muscle Skeletal	GTEx
rs6446275	AMT	cis	Artery Tibial	GTEx
rs6446275	NICN1	cis	Thyroid	GTEx

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49465600-49467200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:49465800-49467200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr3:49465800-49467200	Active TSS	Rectal Mucosa Donor 29	rectum
4	chr3:49465800-49467400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr3:49465800-49467400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr3:49465800-49467600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr3:49465800-49467600	Active TSS	K562	blood
8	chr3:49466000-49467200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr3:49466000-49467200	Active TSS	Cortex derived primary cultured neurospheres	brain
10	chr3:49466000-49467200	Active TSS	HepG2	liver
11	chr3:49466000-49467400	Active TSS	ES-I3 Cell Line	embryonic stem cell
12	chr3:49466000-49467400	Active TSS	H9 Cell Line	embryonic stem cell
13	chr3:49466000-49467400	Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr3:49466000-49467400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr3:49466000-49467400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr3:49466000-49467400	Active TSS	Fetal Brain Female	brain
17	chr3:49466000-49467400	Active TSS	Pancreatic Islets	Pancreatic Islet
18	chr3:49466000-49467600	Active TSS	H1 Cell Line	embryonic stem cell
19	chr3:49466000-49467600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr3:49466000-49467600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr3:49466000-49467600	Active TSS	iPS-15b Cell Line	embryonic stem cell
22	chr3:49466000-49467600	Active TSS	iPS-18 Cell Line	embryonic stem cell
23	chr3:49466000-49467600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr3:49466000-49467600	Active TSS	Rectal Smooth Muscle	rectum
25	chr3:49466000-49467800	Active TSS	HUES64 Cell Line	embryonic stem cell
26	chr3:49466000-49467800	Active TSS	iPS-20b Cell Line	embryonic stem cell
27	chr3:49466000-49467800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr3:49466000-49467800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr3:49466000-49467800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr3:49466000-49467800	Active TSS	Duodenum Mucosa	Duodenum
31	chr3:49466200-49467000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr3:49466200-49467000	Flanking Active TSS	Primary hematopoietic stem cells	blood
33	chr3:49466200-49467200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
34	chr3:49466200-49467200	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr3:49466200-49467200	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr3:49466200-49467200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr3:49466200-49467200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr3:49466200-49467200	Active TSS	Primary T killer memory cells from peripheral blood	blood
39	chr3:49466200-49467200	Active TSS	Colonic Mucosa	Colon
40	chr3:49466200-49467200	Active TSS	Fetal Kidney	kidney
41	chr3:49466200-49467400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr3:49466200-49467400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr3:49466200-49467400	Flanking Active TSS	Primary T cells fromperipheralblood	blood
44	chr3:49466200-49467400	Active TSS	Aorta	Aorta
45	chr3:49466200-49467400	Active TSS	Brain Cingulate Gyrus	brain
46	chr3:49466200-49467400	Active TSS	Ovary	ovary
47	chr3:49466200-49467400	Active TSS	Psoas Muscle	Psoas
48	chr3:49466200-49467400	Active TSS	Right Atrium	heart
49	chr3:49466200-49467400	Active TSS	Right Ventricle	heart
50	chr3:49466200-49467400	Active TSS	HSMM	muscle

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