Variant report

Variant	rs3448
Chromosome Location	chr3:49396751-49396752
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:49395044-49396847	GM12878	blood:	n/a	n/a
2	POLR2A	chr3:49394446-49396988	GM12878	blood:	n/a	n/a
3	MXI1	chr3:49394979-49397650	SK-N-SH	brain:	n/a	chr3:49395802-49395811
4	MAZ	chr3:49394761-49397031	IMR90	lung:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
5	POLR2A	chr3:49394396-49396923	GM12892	blood:	n/a	n/a
6	FOS	chr3:49395022-49397450	HUVEC	blood vessel:	n/a	chr3:49397250-49397261
7	POLR2A	chr3:49395027-49396752	PFSK-1	brain:	n/a	n/a
8	SP1	chr3:49396499-49397875	H1-hESC	embryonic stem cell:	n/a	chr3:49396527-49396541
9	MAX	chr3:49395677-49396899	HepG2	liver:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
10	POLR2A	chr3:49394441-49396946	HUVEC	blood vessel:	n/a	n/a
11	POLR2A	chr3:49394641-49396893	HUVEC	blood vessel:	n/a	n/a
12	HCFC1	chr3:49395536-49396844	Hela-S3	cervix:	n/a	n/a
13	POLR2A	chr3:49396733-49396881	Hela-S3	cervix:	n/a	n/a
14	PML	chr3:49394427-49396801	GM12878	blood:	n/a	n/a
15	POLR2A	chr3:49394945-49396932	SK-N-SH	brain:	n/a	n/a
16	POLR2A	chr3:49396626-49396871	GM12891	blood:	n/a	n/a
17	POLR2A	chr3:49394497-49396902	GM12892	blood:	n/a	n/a
18	POLR2A	chr3:49395042-49396761	PFSK-1	brain:	n/a	n/a
19	GATA1	chr3:49396701-49397506	PBDE	blood:	n/a	n/a
20	POLR2A	chr3:49394438-49396842	GM12892	blood:	n/a	n/a
21	POLR2A	chr3:49394614-49397838	HepG2	liver:	n/a	n/a
22	POLR2A	chr3:49396638-49396868	Hela-S3	cervix:	n/a	n/a
23	ZNF263	chr3:49395575-49396823	HEK293-T-REx	kidney:	n/a	chr3:49396200-49396209
24	POLR2A	chr3:49394568-49396884	GM12891	blood:	n/a	n/a
25	CTCF	chr3:49396606-49396970	T-47D	breast:	n/a	n/a
26	POLR2A	chr3:49395567-49396790	HepG2	liver:	n/a	n/a
27	POLR2A	chr3:49396639-49396847	GM12878	blood:	n/a	n/a
28	POLR2A	chr3:49394896-49396954	HUVEC	blood vessel:	n/a	n/a
29	MTA3	chr3:49394459-49396757	GM12878	blood:	n/a	n/a
30	POLR2A	chr3:49394523-49396914	GM12891	blood:	n/a	n/a
31	POLR2A	chr3:49394472-49396855	GM12892	blood:	n/a	n/a
32	POLR2A	chr3:49394839-49396903	HUVEC	blood vessel:	n/a	n/a
33	POLR2A	chr3:49394437-49396905	GM12878	blood:	n/a	n/a
34	POLR2A	chr3:49394552-49396886	GM12891	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:49394592..49396828-chr3:49447365..49450223,2	K562	blood:
2	chr2:10183042..10184037-chr3:49396115..49396938,2	Hela-S3	cervix:
3	chr3:49376495..49379313-chr3:49396208..49398833,3	K562	blood:

Variant related genes	Relation type
GPX1	TF binding region
ENSG00000067560	Chromatin interaction
ENSG00000114316	Chromatin interaction
ENSG00000145022	Chromatin interaction
ENSG00000172059	Chromatin interaction

Extended variants
information (count: 133 )
Associated
traits (count: 33 )

rSNPs within LD-proxies of this variant (count:133)

rs_ID	r²[population]
rs1009051	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10154992	1.00[CEU][hapmap];1.00[GIH][hapmap];0.90[TSI][hapmap];1.00[ASN][1000 genomes]
rs10155014	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10452032	1.00[ASN][1000 genomes]
rs10865956	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];1.00[ASN][1000 genomes]
rs1106620	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11130183	0.95[CEU][hapmap];1.00[GIH][hapmap];0.91[TSI][hapmap];1.00[ASN][1000 genomes]
rs11130186	0.91[CEU][hapmap];1.00[GIH][hapmap];0.91[TSI][hapmap];1.00[ASN][1000 genomes]
rs11130187	1.00[ASN][1000 genomes]
rs11130190	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130207	1.00[ASN][1000 genomes]
rs11130208	1.00[ASN][1000 genomes]
rs11710434	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11715060	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11719762	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11720542	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11720657	0.86[CEU][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12583	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12637313	1.00[ASN][1000 genomes]
rs13084037	1.00[ASN][1000 genomes]
rs13096474	1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13096480	1.00[ASN][1000 genomes]
rs13322887	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1463728	1.00[ASN][1000 genomes]
rs1464569	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1532204	1.00[ASN][1000 genomes]
rs1586827	1.00[ASN][1000 genomes]
rs1982861	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap]
rs2029591	1.00[ASN][1000 genomes]
rs2082923	1.00[ASN][1000 genomes]
rs2099526	1.00[ASN][1000 genomes]
rs2131108	1.00[ASN][1000 genomes]
rs2140270	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2177268	1.00[CEU][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2329021	1.00[ASN][1000 genomes]
rs2329025	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35713889	1.00[ASN][1000 genomes]
rs3866330	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];0.97[TSI][hapmap]
rs3870339	0.95[CEU][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3905330	1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap]
rs4052546	0.80[EUR][1000 genomes]
rs4241405	1.00[ASN][1000 genomes]
rs4384984	1.00[ASN][1000 genomes]
rs4855848	1.00[ASN][1000 genomes]
rs4855849	1.00[ASN][1000 genomes]
rs4855853	1.00[ASN][1000 genomes]
rs4855858	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4855869	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4955413	0.85[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs4955414	1.00[ASN][1000 genomes]
rs4955417	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[TSI][hapmap]
rs4955421	1.00[ASN][1000 genomes]
rs4955423	1.00[ASN][1000 genomes]
rs4955424	0.96[EUR][1000 genomes]
rs4955425	0.95[EUR][1000 genomes]
rs4955427	1.00[ASN][1000 genomes]
rs4955430	1.00[CEU][hapmap];1.00[GIH][hapmap];0.84[MEX][hapmap];0.97[TSI][hapmap];0.91[YRI][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4955439	0.95[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs4955443	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[TSI][hapmap];1.00[ASN][1000 genomes]
rs56127630	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57273516	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62259933	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259943	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259944	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62259947	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62261183	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62261249	1.00[ASN][1000 genomes]
rs62262672	1.00[ASN][1000 genomes]
rs62262673	1.00[ASN][1000 genomes]
rs62262675	1.00[ASN][1000 genomes]
rs6446256	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs6446257	0.95[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs6446262	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6446275	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6446285	1.00[ASN][1000 genomes]
rs6446286	1.00[ASN][1000 genomes]
rs6769744	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6769821	0.95[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[ASN][1000 genomes]
rs6775069	0.97[EUR][1000 genomes]
rs6778080	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6783003	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs6784203	0.96[EUR][1000 genomes]
rs6785045	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6790105	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6796147	0.94[EUR][1000 genomes]
rs6797299	1.00[ASN][1000 genomes]
rs6805609	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6808036	1.00[ASN][1000 genomes]
rs6809204	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6809851	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap]
rs72934271	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088137	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7355800	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7374731	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7429661	0.95[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs7613491	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7617480	1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs7619016	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs7619789	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7620024	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7622786	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7626076	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs7631586	1.00[ASN][1000 genomes]
rs7638750	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7644148	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes]
rs7647973	1.00[CEU][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7648995	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7651372	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7653505	0.87[MKK][hapmap]
rs8897	1.00[ASW][hapmap];1.00[CEU][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs940045	1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9586	1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs9654010	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs974495	1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9757181	1.00[CEU][hapmap]
rs9809237	0.82[EUR][1000 genomes]
rs9811047	0.83[AMR][1000 genomes]
rs9812360	0.91[EUR][1000 genomes]
rs9817807	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9824435	1.00[ASN][1000 genomes]
rs9830730	1.00[ASN][1000 genomes]
rs9831648	1.00[GIH][hapmap];0.94[TSI][hapmap];1.00[ASN][1000 genomes]
rs9834003	0.95[CEU][hapmap];1.00[GIH][hapmap];0.91[TSI][hapmap];1.00[ASN][1000 genomes]
rs9834535	0.83[EUR][1000 genomes]
rs9842132	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9847585	0.83[EUR][1000 genomes]
rs9860055	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9860285	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9861027	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9867285	1.00[ASN][1000 genomes]
rs9871024	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9881860	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9883000	1.00[ASN][1000 genomes]

mRNA abundance (count:33)

SNP	Gene	Cis/trans	Tissue	Source
rs3448	AMT	cis	Whole Blood	GTEx
rs3448	AMT	cis	Skin Sun Exposed Lower leg	GTEx
rs3448	GMPPB	cis	parietal	SCAN
rs3448	AMT	cis	Esophagus Muscularis	GTEx
rs3448	AMT	cis	Thyroid	GTEx
rs3448	AMT	cis	Adipose Subcutaneous	GTEx
rs3448	AMT	cis	Artery Aorta	GTEx
rs3448	AMT	Cis_1M	lymphoblastoid	RTeQTL
rs3448	AMT	cis	Artery Tibial	GTEx
rs3448	AMT	cis	cerebellum	SCAN
rs3448	AMT	cis	Nerve Tibial	GTEx
rs3448	LZTFL1	cis	cerebellum	SCAN
rs3448	AMT	cis	lymphoblastoid	seeQTL
rs3448	ZNF589	cis	parietal	SCAN
rs3448	AMT	cis	lung	GTEx
rs3448	GPX1	cis	parietal	SCAN
rs3448	AMT	cis	Muscle Skeletal	GTEx
rs3448	NICN1	cis	cerebellum	SCAN
rs3448	AMT	cis	Esophagus Mucosa	GTEx
rs3448	NICN1-AS1	cis	Thyroid	GTEx
rs3448	DALRD3	cis	parietal	SCAN
rs3448	WDR6	cis	parietal	SCAN
rs3448	SEMA3G	cis	cerebellum	SCAN
rs3448	QRICH1	cis	cerebellum	SCAN
rs3448	P4HTM	cis	parietal	SCAN
rs3448	DALRD3	cis	cerebellum	SCAN
rs3448	WDR6	cis	Muscle Skeletal	GTEx
rs3448	WDR6	cis	cerebellum	SCAN
rs3448	NICN1	cis	Thyroid	GTEx
rs3448	AMT	cis	parietal	SCAN
rs3448	WDR6	cis	Nerve Tibial	GTEx
rs3448	NME6	cis	cerebellum	SCAN
rs3448	WDR6	cis	Esophagus Muscularis	GTEx

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49393600-49396800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr3:49393600-49397000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr3:49395800-49396800	Transcr. at gene 5' and 3'	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr3:49395800-49396800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
5	chr3:49396000-49396800	Transcr. at gene 5' and 3'	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr3:49396000-49396800	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr3:49396000-49396800	Transcr. at gene 5' and 3'	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr3:49396000-49396800	Flanking Active TSS	Liver	Liver
9	chr3:49396000-49396800	Transcr. at gene 5' and 3'	Fetal Intestine Small	intestine
10	chr3:49396000-49396800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
11	chr3:49396000-49396800	Flanking Active TSS	A549	lung
12	chr3:49396000-49396800	Flanking Active TSS	HUVEC	blood vessel
13	chr3:49396000-49397000	Flanking Active TSS	HepG2	liver
14	chr3:49396000-49397200	Enhancers	Fetal Heart	heart
15	chr3:49396200-49396800	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr3:49396200-49396800	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr3:49396200-49396800	Genic enhancers	Primary neutrophils fromperipheralblood	blood
18	chr3:49396200-49396800	Enhancers	Primary T helper naive cells from peripheral blood	blood
19	chr3:49396200-49396800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
20	chr3:49396200-49396800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr3:49396200-49396800	Genic enhancers	Spleen	Spleen
22	chr3:49396200-49396800	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
23	chr3:49396200-49397000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
24	chr3:49396200-49397000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
25	chr3:49396200-49397200	Weak transcription	Fetal Kidney	kidney
26	chr3:49396200-49397600	Transcr. at gene 5' and 3'	Dnd41	blood
27	chr3:49396200-49397800	Genic enhancers	NH-A	brain
28	chr3:49396200-49398200	Weak transcription	Ovary	ovary
29	chr3:49396400-49396800	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr3:49396400-49396800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr3:49396400-49396800	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
32	chr3:49396400-49396800	Genic enhancers	Primary T cells fromperipheralblood	blood
33	chr3:49396400-49396800	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
34	chr3:49396400-49396800	Genic enhancers	Primary T helper 17 cells PMA-I stimulated	--
35	chr3:49396400-49396800	Genic enhancers	Primary T helper cells fromperipheralblood	blood
36	chr3:49396400-49396800	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr3:49396400-49396800	Genic enhancers	Cortex derived primary cultured neurospheres	brain
38	chr3:49396400-49396800	Enhancers	Brain Germinal Matrix	brain
39	chr3:49396400-49396800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
40	chr3:49396400-49396800	Genic enhancers	Esophagus	oesophagus
41	chr3:49396400-49396800	Enhancers	Fetal Brain Female	brain
42	chr3:49396400-49396800	Genic enhancers	Fetal Lung	lung
43	chr3:49396400-49396800	Genic enhancers	Fetal Thymus	thymus
44	chr3:49396400-49396800	Enhancers	Lung	lung
45	chr3:49396400-49396800	Transcr. at gene 5' and 3'	HSMMtube	muscle
46	chr3:49396400-49396800	Transcr. at gene 5' and 3'	Monocytes-CD14+_RO01746	blood
47	chr3:49396400-49397000	Genic enhancers	Primary T cells from cord blood	blood
48	chr3:49396400-49397000	Genic enhancers	Primary T helper cells PMA-I stimulated	--
49	chr3:49396400-49397000	Genic enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr3:49396400-49397000	Genic enhancers	Brain Anterior Caudate	brain

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