Variant report

Variant	rs13107285
Chromosome Location	chr4:103283598-103283599
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:103282354..103284340-chr4:103355971..103358211,2	K562	blood:

Extended variants
information (count: 75 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:75)

rs_ID	r²[population]
rs10008684	0.82[AMR][1000 genomes]
rs10019247	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10461136	0.92[EUR][1000 genomes]
rs10516492	0.89[ASN][1000 genomes]
rs10516493	0.89[ASN][1000 genomes]
rs11097775	0.85[ASN][1000 genomes]
rs11097776	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11097777	0.83[ASN][1000 genomes]
rs11097779	0.84[ASN][1000 genomes]
rs11097780	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1117522	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1159788	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11728286	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11730379	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11730944	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11730958	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11935847	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12499248	0.95[EUR][1000 genomes]
rs12500141	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12505568	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12508086	0.83[ASN][1000 genomes]
rs12508121	0.83[ASN][1000 genomes]
rs12510124	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13104988	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13112930	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13114804	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13125848	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13147260	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1381893	0.93[EUR][1000 genomes]
rs1381894	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1381895	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1381897	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1381899	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1462943	0.93[EUR][1000 genomes]
rs1462945	0.83[ASN][1000 genomes]
rs1462948	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1462949	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1462950	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1462951	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1462952	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1599684	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1599685	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1599686	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17032552	0.85[ASN][1000 genomes]
rs1870952	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2054393	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2086004	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2126625	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34835832	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34927061	0.89[ASN][1000 genomes]
rs35651507	0.89[ASN][1000 genomes]
rs4146611	0.85[ASN][1000 genomes]
rs4356914	0.85[ASN][1000 genomes]
rs4594728	0.85[ASN][1000 genomes]
rs4699019	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4699020	0.85[ASN][1000 genomes]
rs4699021	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4699024	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4699026	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs55801262	0.85[ASN][1000 genomes]
rs56202913	0.89[ASN][1000 genomes]
rs56344531	0.85[ASN][1000 genomes]
rs62328212	0.85[ASN][1000 genomes]
rs6810692	0.82[EUR][1000 genomes]
rs6814302	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6835467	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6843751	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6844796	0.92[EUR][1000 genomes]
rs6856314	0.89[ASN][1000 genomes]
rs7657947	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7661593	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7683109	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7695249	0.85[ASN][1000 genomes]
rs962399	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs984055	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103272600-103284200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:103275200-103284400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr4:103277200-103284600	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr4:103283400-103283600	Enhancers	Rectal Mucosa Donor 31	rectum
5	chr4:103283400-103284800	Enhancers	Sigmoid Colon	Sigmoid Colon

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