Variant report

Variant	rs13147260
Chromosome Location	chr4:103335061-103335062
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:103322877..103324827-chr4:103334195..103335795,2	K562	blood:

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs10008684	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10019247	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10461136	0.84[EUR][1000 genomes]
rs11097776	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11097780	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1117522	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1159788	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11728286	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11730379	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11730944	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11730958	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11935847	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12499248	0.87[EUR][1000 genomes]
rs12500141	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12505568	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12510124	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12513257	0.87[ASN][1000 genomes]
rs13104988	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13107285	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13112930	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs13114804	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13125848	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1381893	0.85[EUR][1000 genomes]
rs1381894	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1381895	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1381897	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1381899	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1462943	0.85[EUR][1000 genomes]
rs1462948	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1462949	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1462950	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1462951	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1462952	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1599684	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1599685	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1599686	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1870952	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2054393	0.86[EUR][1000 genomes]
rs2086004	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2126625	0.89[EUR][1000 genomes]
rs34197129	0.87[ASN][1000 genomes]
rs34835832	0.87[EUR][1000 genomes]
rs4699019	0.91[EUR][1000 genomes]
rs4699021	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4699024	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4699026	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4699027	0.85[ASN][1000 genomes]
rs62328503	0.85[ASN][1000 genomes]
rs6814302	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6835467	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6843751	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6844796	0.84[EUR][1000 genomes]
rs7657947	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7661593	0.91[EUR][1000 genomes]
rs7683109	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs962399	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs984055	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103325000-103341600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:103333400-103337800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr4:103334800-103335200	Enhancers	Hela-S3	cervix

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