Variant report

Variant	rs1381897
Chromosome Location	chr4:103324850-103324851
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10008684	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10019247	0.82[AMR][1000 genomes]
rs10461136	0.85[EUR][1000 genomes]
rs11097776	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11097780	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1117520	0.95[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap]
rs1117522	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1159788	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11728286	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11730379	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11730944	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11730958	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11935847	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12499248	0.95[CEU][hapmap];0.87[EUR][1000 genomes]
rs12500141	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12505568	0.82[AMR][1000 genomes]
rs12510124	0.95[CEU][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes]
rs13104988	0.82[AMR][1000 genomes]
rs13107285	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13112930	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13114804	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13125848	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13147260	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1381893	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs1381894	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1381895	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1381899	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1462943	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs1462948	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1462949	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1462950	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1462951	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1462952	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1599684	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1599685	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1599686	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1870952	0.92[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2054393	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs2086004	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2126625	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34197129	0.89[JPT][hapmap]
rs34835832	0.89[EUR][1000 genomes]
rs4699012	0.83[CEU][hapmap]
rs4699019	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4699021	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4699024	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4699026	0.91[CEU][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes]
rs6810692	0.82[EUR][1000 genomes]
rs6814302	0.91[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6835467	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6843751	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6844796	0.86[EUR][1000 genomes]
rs6856314	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs7436937	0.95[CEU][hapmap]
rs7657947	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7661593	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7683109	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs962399	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs984055	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9996947	0.89[JPT][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103317200-103327400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr4:103323400-103328400	Weak transcription	Psoas Muscle	Psoas
3	chr4:103323800-103326200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr4:103324000-103325800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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