Variant report

Variant	rs10516493
Chromosome Location	chr4:103284644-103284645
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs10516492	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11097775	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11097776	0.85[ASN][1000 genomes]
rs11097777	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11097779	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1117520	0.90[CHB][hapmap];0.94[JPT][hapmap]
rs1117522	0.85[ASN][1000 genomes]
rs1159788	0.85[ASN][1000 genomes]
rs11728286	0.89[ASN][1000 genomes]
rs11730379	0.89[ASN][1000 genomes]
rs11730944	0.82[ASN][1000 genomes]
rs11730958	0.82[ASN][1000 genomes]
rs11931217	0.96[CEU][hapmap];0.91[EUR][1000 genomes]
rs11935847	0.85[ASN][1000 genomes]
rs12508086	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12508121	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12510124	0.89[JPT][hapmap]
rs13107285	0.89[ASN][1000 genomes]
rs13125848	0.85[ASN][1000 genomes]
rs1381899	0.85[ASN][1000 genomes]
rs1462945	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1462948	0.85[ASN][1000 genomes]
rs1462949	0.85[ASN][1000 genomes]
rs1462950	0.91[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs1462951	0.85[ASN][1000 genomes]
rs1462952	0.91[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs1599684	0.89[ASN][1000 genomes]
rs1599685	0.85[ASN][1000 genomes]
rs1599686	0.85[ASN][1000 genomes]
rs17032552	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1870952	0.91[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2086004	0.85[ASN][1000 genomes]
rs2126625	0.89[ASN][1000 genomes]
rs34197129	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs34663993	0.89[EUR][1000 genomes]
rs34927061	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35651507	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4146611	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4356914	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4594728	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4699019	0.85[ASN][1000 genomes]
rs4699020	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4699021	0.85[ASN][1000 genomes]
rs4699024	0.82[ASN][1000 genomes]
rs4699026	0.89[JPT][hapmap]
rs4699027	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55801262	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56202729	1.00[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs56202913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56344531	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62328212	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62328503	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62329487	0.92[EUR][1000 genomes]
rs6814302	0.90[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs6835467	0.85[ASN][1000 genomes]
rs6843751	0.85[ASN][1000 genomes]
rs6856314	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7657947	0.85[ASN][1000 genomes]
rs7661593	0.85[ASN][1000 genomes]
rs7683109	0.82[ASN][1000 genomes]
rs7695249	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs962399	0.84[ASN][1000 genomes]
rs984055	0.84[ASN][1000 genomes]
rs9996947	0.85[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103283400-103284800	Enhancers	Sigmoid Colon	Sigmoid Colon
2	chr4:103284000-103285000	Enhancers	Rectal Mucosa Donor 31	rectum
3	chr4:103284200-103284800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr4:103284400-103284800	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr4:103284600-103284800	Bivalent Enhancer	Small Intestine	intestine
6	chr4:103284600-103285000	Enhancers	Rectal Mucosa Donor 29	rectum

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