Variant report

Variant	rs13211473
Chromosome Location	chr6:149142028-149142029
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:149139602..149142169-chr6:149143685..149146727,3	MCF-7	breast:

rs_ID	r²[population]
rs1842771	0.89[CEU][hapmap];0.88[AMR][1000 genomes]
rs1842772	0.88[CEU][hapmap]
rs2128333	0.88[CEU][hapmap]
rs2242298	0.85[CEU][hapmap]
rs4895772	0.91[ASN][1000 genomes]
rs9373575	0.88[CEU][hapmap]
rs9403987	0.89[CEU][hapmap]
rs9403988	0.88[CEU][hapmap];1.00[JPT][hapmap]
rs9403989	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs9403990	0.88[CEU][hapmap];1.00[JPT][hapmap]

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149115800-149144800	Weak transcription	Primary B cells from cord blood	blood
2	chr6:149135600-149147800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr6:149139400-149143600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr6:149139400-149144200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr6:149139600-149144400	Weak transcription	Primary B cells from peripheral blood	blood
6	chr6:149139600-149150400	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr6:149141000-149144000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr6:149141000-149146400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr6:149141200-149146400	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr6:149141200-149146600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr6:149141200-149146600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr6:149141400-149151200	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr6:149141400-149151200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr6:149141600-149143000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr6:149141600-149143200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
16	chr6:149141600-149148000	Weak transcription	HUES48 Cell Line	embryonic stem cell
17	chr6:149141600-149150000	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr6:149141600-149150200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr6:149141600-149157800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
20	chr6:149141800-149142800	Weak transcription	HUES64 Cell Line	embryonic stem cell

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