Variant report
| Variant | rs1842771 |
|---|---|
| Chromosome Location | chr6:149135396-149135397 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:149115800-149144800 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr6:149125600-149136000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr6:149125800-149137000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr6:149128200-149135800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 5 | chr6:149128200-149136800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr6:149128800-149138000 | Weak transcription | Ovary | ovary |
| 7 | chr6:149131200-149136400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 8 | chr6:149133800-149137200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 9 | chr6:149134800-149135600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 10 | chr6:149135200-149135600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 11 | chr6:149135200-149135600 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 12 | chr6:149135200-149135600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 13 | chr6:149135200-149135600 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 14 | chr6:149135200-149135600 | Enhancers | NHDF-Ad | bronchial |
| 15 | chr6:149135200-149136400 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
