Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:16149823..16152232-chr11:16154074..16156532,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12099169	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs12099171	1.00[CEU][hapmap]
rs12099378	1.00[CEU][hapmap]
rs16924860	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932477	1.00[CEU][hapmap]
rs16932478	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932480	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932482	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932486	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932493	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932497	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932507	1.00[CEU][hapmap]
rs16932558	1.00[CEU][hapmap]
rs16932582	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932628	1.00[CEU][hapmap]
rs16932631	1.00[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs16932695	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932698	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs16932704	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs2351680	0.86[AFR][1000 genomes]
rs4373881	1.00[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs996857	1.00[CEU][hapmap];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv553562	chr11:16112180-16220289	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv529731	chr11:16122782-16468170	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16148400-16155600	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr11:16148400-16160200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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