Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EPDR1-1	chr7:38052956-38053183	XLOC_006053

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10488618	0.83[ASN][1000 genomes]
rs1349396	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1376254	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1376267	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1524051	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1524052	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17171238	0.83[ASN][1000 genomes]
rs17171240	0.86[ASN][1000 genomes]
rs17171245	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17171248	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1949774	0.89[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2044830	0.86[ASN][1000 genomes]
rs2122620	0.83[ASN][1000 genomes]
rs2392527	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4430011	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55971087	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57948667	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61618798	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6965376	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs73691906	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs952368	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs952369	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9648456	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv8074	chr7:37865340-38210087	ZNF genes & repeats Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38052200-38053000	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr7:38052400-38059600	Weak transcription	HSMM	muscle
3	chr7:38052800-38059400	Weak transcription	HSMMtube	muscle

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