The 2.0 version of rSNPBase

Variant report

Variant rs1492900
Chromosome Location chr1:172615117-172615118
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172608800-172624000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:172609800-172616000 Weak transcription NH-A brain
3 chr1:172613000-172615400 Weak transcription Right Ventricle heart
4 chr1:172613000-172616400 Weak transcription Right Atrium heart
5 chr1:172613000-172617200 Enhancers Primary T helper cells PMA-I stimulated --
6 chr1:172613200-172620200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:172613200-172620200 Weak transcription HMEC breast
8 chr1:172613400-172615800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:172613400-172616200 Weak transcription Osteobl bone
10 chr1:172613600-172616200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:172613600-172616200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr1:172613600-172623400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:172613800-172615800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr1:172613800-172623400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:172614000-172615800 Weak transcription Primary T cells fromperipheralblood blood
16 chr1:172614000-172615800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:172614000-172616000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:172614200-172615600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:172614400-172615400 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:172614400-172615600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:172614400-172615600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:172614400-172615600 Weak transcription Dnd41 blood
23 chr1:172614600-172616800 Enhancers Left Ventricle heart
24 chr1:172614800-172615200 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:172614800-172615600 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:172614800-172615600 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr1:172614800-172615800 Weak transcription Primary T cells from cord blood blood
28 chr1:172615000-172615400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:172615000-172617000 Enhancers Fetal Thymus thymus

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Last update: Aug 31, 2015