The 2.0 version of rSNPBase

Variant report

Variant rs2859242
Chromosome Location chr1:172624864-172624865
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172616800-172627400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:172617400-172626800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:172617600-172626800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:172622400-172626800 Weak transcription Left Ventricle heart
5 chr1:172622600-172627200 Weak transcription Primary T cells from cord blood blood
6 chr1:172622800-172627400 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr1:172623200-172625000 Enhancers HMEC breast
8 chr1:172623600-172628000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:172623800-172627600 Weak transcription K562 blood
10 chr1:172624000-172626800 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr1:172624000-172631800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:172624200-172640600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr1:172624400-172627200 Weak transcription A549 lung
14 chr1:172624400-172631600 Weak transcription NHEK skin
15 chr1:172624400-172631800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:172624600-172626800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:172624600-172631600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:172624800-172627200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015