The 2.0 version of rSNPBase

Variant report

Variant rs2131373
Chromosome Location chr1:172623436-172623437
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172608800-172624000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:172616800-172623600 Weak transcription NH-A brain
3 chr1:172616800-172627400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr1:172617400-172626800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:172617600-172623800 Weak transcription Osteobl bone
6 chr1:172617600-172626800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:172621400-172623600 Enhancers Dnd41 blood
8 chr1:172622000-172624400 Enhancers NHEK skin
9 chr1:172622400-172624000 Enhancers Primary T helper cells PMA-I stimulated --
10 chr1:172622400-172624200 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:172622400-172624400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:172622400-172626800 Weak transcription Left Ventricle heart
13 chr1:172622600-172623600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:172622600-172623600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:172622600-172623600 Weak transcription A549 lung
16 chr1:172622600-172627200 Weak transcription Primary T cells from cord blood blood
17 chr1:172622800-172627400 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr1:172623200-172624600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:172623200-172624600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:172623200-172625000 Enhancers HMEC breast
21 chr1:172623400-172623600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:172623400-172624200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:172623400-172624800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015