The 2.0 version of rSNPBase

Variant report

Variant rs1644661
Chromosome Location chr19:37472224-37472225
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37464800-37473600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr19:37464800-37482000 Weak transcription HSMMtube muscle
3 chr19:37465000-37473600 Weak transcription Small Intestine intestine
4 chr19:37465000-37487200 Weak transcription Placenta Placenta
5 chr19:37465200-37473000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr19:37465200-37473600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr19:37465200-37476800 Weak transcription NH-A brain
8 chr19:37465200-37481800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr19:37465200-37482600 Weak transcription Right Ventricle heart
10 chr19:37465400-37473800 Weak transcription Spleen Spleen
11 chr19:37465400-37483400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr19:37465400-37483600 Weak transcription Fetal Heart heart
13 chr19:37465600-37474200 Weak transcription Colonic Mucosa Colon
14 chr19:37465600-37482400 Weak transcription Fetal Kidney kidney
15 chr19:37466400-37472800 Strong transcription Fetal Muscle Trunk muscle
16 chr19:37467000-37472400 Strong transcription Dnd41 blood
17 chr19:37467000-37474600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:37468400-37472800 Strong transcription Cortex derived primary cultured neurospheres brain
19 chr19:37468400-37474400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:37468400-37474400 ZNF genes & repeats Liver Liver
21 chr19:37468600-37472400 Strong transcription Fetal Muscle Leg muscle
22 chr19:37468800-37473400 Strong transcription Primary T helper naive cells from peripheral blood blood
23 chr19:37468800-37487800 Weak transcription Muscle Satellite Cultured Cells --
24 chr19:37469000-37473200 Strong transcription Skeletal Muscle Female skeletal muscle
25 chr19:37469000-37474000 Weak transcription NHDF-Ad bronchial
26 chr19:37469200-37473000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr19:37469200-37473800 Weak transcription Primary B cells from peripheral blood blood
28 chr19:37469400-37479200 Weak transcription Rectal Smooth Muscle rectum
29 chr19:37469600-37472400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr19:37469800-37474000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr19:37469800-37474200 Weak transcription Lung lung
32 chr19:37469800-37477600 Weak transcription Aorta Aorta
33 chr19:37470200-37472400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr19:37470400-37477000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr19:37470400-37477600 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr19:37470600-37482200 Weak transcription Psoas Muscle Psoas
37 chr19:37470800-37473200 Strong transcription Primary T cells fromperipheralblood blood
38 chr19:37471200-37472400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
39 chr19:37471200-37472600 Strong transcription Primary T killer naive cells fromperipheralblood blood
40 chr19:37471400-37472400 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
41 chr19:37471600-37472600 Strong transcription Fetal Intestine Small intestine
42 chr19:37471600-37474400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
43 chr19:37471800-37472600 Weak transcription HSMM muscle
44 chr19:37471800-37473000 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr19:37471800-37473000 Weak transcription Thymus Thymus
46 chr19:37471800-37473200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr19:37471800-37476400 Weak transcription Primary B cells from cord blood blood
48 chr19:37471800-37478000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr19:37471800-37480400 Weak transcription Gastric stomach
50 chr19:37471800-37480600 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015