The 2.0 version of rSNPBase

Variant report

Variant rs2595545
Chromosome Location chr19:37477101-37477102
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37464800-37482000 Weak transcription HSMMtube muscle
2 chr19:37465000-37487200 Weak transcription Placenta Placenta
3 chr19:37465200-37481800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr19:37465200-37482600 Weak transcription Right Ventricle heart
5 chr19:37465400-37483400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr19:37465400-37483600 Weak transcription Fetal Heart heart
7 chr19:37465600-37482400 Weak transcription Fetal Kidney kidney
8 chr19:37468800-37487800 Weak transcription Muscle Satellite Cultured Cells --
9 chr19:37469400-37479200 Weak transcription Rectal Smooth Muscle rectum
10 chr19:37469800-37477600 Weak transcription Aorta Aorta
11 chr19:37470400-37477600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr19:37470600-37482200 Weak transcription Psoas Muscle Psoas
13 chr19:37471800-37478000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:37471800-37480400 Weak transcription Gastric stomach
15 chr19:37471800-37480600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr19:37471800-37482000 Weak transcription Left Ventricle heart
17 chr19:37471800-37482600 Weak transcription Brain Substantia Nigra brain
18 chr19:37472000-37477600 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr19:37472000-37477600 Weak transcription Fetal Brain Female brain
20 chr19:37472000-37477800 Weak transcription Brain Hippocampus Middle brain
21 chr19:37472000-37479200 Weak transcription Pancreas Pancrea
22 chr19:37472000-37479400 Weak transcription Brain Inferior Temporal Lobe brain
23 chr19:37472000-37481600 Weak transcription Brain Anterior Caudate brain
24 chr19:37472000-37483600 Weak transcription Osteobl bone
25 chr19:37472200-37477600 Weak transcription Stomach Smooth Muscle stomach
26 chr19:37472200-37479200 Weak transcription Fetal Lung lung
27 chr19:37472200-37479400 Weak transcription Fetal Intestine Large intestine
28 chr19:37472200-37479800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr19:37472200-37481800 Weak transcription Colon Smooth Muscle Colon
30 chr19:37472200-37485800 Weak transcription Brain Cingulate Gyrus brain
31 chr19:37472200-37487000 Weak transcription Placenta Amnion Placenta Amnion
32 chr19:37472200-37487400 Weak transcription Brain Angular Gyrus brain
33 chr19:37472400-37478000 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr19:37472400-37481800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr19:37472400-37482400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr19:37472400-37482400 Weak transcription Dnd41 blood
37 chr19:37472800-37479200 Weak transcription Fetal Muscle Trunk muscle
38 chr19:37473000-37482000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr19:37473200-37478200 Weak transcription Primary T cells fromperipheralblood blood
40 chr19:37473200-37481800 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr19:37474000-37477600 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr19:37474000-37479000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr19:37474400-37479200 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr19:37476400-37477200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
45 chr19:37476400-37477200 Strong transcription Primary T helper naive cells from peripheral blood blood
46 chr19:37476400-37477200 ZNF genes & repeats Ovary ovary
47 chr19:37476400-37478000 Strong transcription Skeletal Muscle Male skeletal muscle
48 chr19:37476600-37478200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
49 chr19:37476600-37483400 Strong transcription Fetal Stomach stomach
50 chr19:37476800-37477400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015