Variant report

Variant rs12980849
Chromosome Location chr19:37651714-37651715
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37613800-37662200 ZNF genes & repeats Liver Liver
2 chr19:37634400-37657800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr19:37635000-37656200 ZNF genes & repeats Fetal Brain Female brain
4 chr19:37635200-37661400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
5 chr19:37635200-37661600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr19:37637400-37656800 ZNF genes & repeats Brain Anterior Caudate brain
7 chr19:37639400-37663200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr19:37640400-37659000 ZNF genes & repeats Primary B cells from peripheral blood blood
9 chr19:37643000-37661400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
10 chr19:37643000-37662000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
11 chr19:37643200-37654000 ZNF genes & repeats Ovary ovary
12 chr19:37643200-37654000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
13 chr19:37643200-37654400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
14 chr19:37643200-37656800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr19:37643200-37658200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr19:37643200-37660800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
17 chr19:37643200-37661400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
18 chr19:37643200-37662400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:37643400-37652400 ZNF genes & repeats Dnd41 blood
20 chr19:37643400-37653800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
21 chr19:37643400-37654200 ZNF genes & repeats Duodenum Mucosa Duodenum
22 chr19:37643400-37655200 ZNF genes & repeats Brain Hippocampus Middle brain
23 chr19:37643400-37658000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
24 chr19:37643400-37659400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
25 chr19:37643400-37659600 ZNF genes & repeats Adipose Nuclei Adipose
26 chr19:37643400-37660800 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
27 chr19:37643400-37661400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr19:37643400-37661400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
29 chr19:37643800-37652000 ZNF genes & repeats Primary T cells from cord blood blood
30 chr19:37643800-37654000 ZNF genes & repeats Primary hematopoietic stem cells blood
31 chr19:37643800-37656800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
32 chr19:37643800-37662000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr19:37645600-37661600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr19:37646200-37654000 ZNF genes & repeats Left Ventricle heart
35 chr19:37646400-37662000 ZNF genes & repeats Fetal Lung lung
36 chr19:37646800-37655400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr19:37647000-37655600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr19:37647000-37658800 Weak transcription NHDF-Ad bronchial
39 chr19:37647400-37653000 Weak transcription Placenta Amnion Placenta Amnion
40 chr19:37647800-37652600 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
41 chr19:37648400-37654200 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
42 chr19:37648600-37653400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr19:37648800-37654000 ZNF genes & repeats Aorta Aorta
44 chr19:37648800-37654200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
45 chr19:37649200-37652600 ZNF genes & repeats Brain Angular Gyrus brain
46 chr19:37649400-37652400 Weak transcription Right Ventricle heart
47 chr19:37649800-37653200 ZNF genes & repeats Fetal Stomach stomach
48 chr19:37650200-37652800 ZNF genes & repeats Brain Inferior Temporal Lobe brain
49 chr19:37650400-37653200 ZNF genes & repeats Lung lung
50 chr19:37650400-37654200 ZNF genes & repeats Brain Cingulate Gyrus brain

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