The 2.0 version of rSNPBase

Variant report

Variant rs1667352
Chromosome Location chr19:37480376-37480377
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37464800-37482000 Weak transcription HSMMtube muscle
2 chr19:37465000-37487200 Weak transcription Placenta Placenta
3 chr19:37465200-37481800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr19:37465200-37482600 Weak transcription Right Ventricle heart
5 chr19:37465400-37483400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr19:37465400-37483600 Weak transcription Fetal Heart heart
7 chr19:37465600-37482400 Weak transcription Fetal Kidney kidney
8 chr19:37468800-37487800 Weak transcription Muscle Satellite Cultured Cells --
9 chr19:37470600-37482200 Weak transcription Psoas Muscle Psoas
10 chr19:37471800-37480400 Weak transcription Gastric stomach
11 chr19:37471800-37480600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr19:37471800-37482000 Weak transcription Left Ventricle heart
13 chr19:37471800-37482600 Weak transcription Brain Substantia Nigra brain
14 chr19:37472000-37481600 Weak transcription Brain Anterior Caudate brain
15 chr19:37472000-37483600 Weak transcription Osteobl bone
16 chr19:37472200-37481800 Weak transcription Colon Smooth Muscle Colon
17 chr19:37472200-37485800 Weak transcription Brain Cingulate Gyrus brain
18 chr19:37472200-37487000 Weak transcription Placenta Amnion Placenta Amnion
19 chr19:37472200-37487400 Weak transcription Brain Angular Gyrus brain
20 chr19:37472400-37481800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr19:37472400-37482400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr19:37472400-37482400 Weak transcription Dnd41 blood
23 chr19:37473000-37482000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr19:37473200-37481800 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr19:37476600-37483400 Strong transcription Fetal Stomach stomach
26 chr19:37476800-37489400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr19:37477600-37480600 Strong transcription Ovary ovary
28 chr19:37477800-37480400 Weak transcription Stomach Smooth Muscle stomach
29 chr19:37477800-37482200 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr19:37478000-37482400 Weak transcription Brain Hippocampus Middle brain
31 chr19:37478200-37482400 Weak transcription Fetal Brain Male brain
32 chr19:37478400-37481000 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr19:37478400-37482000 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr19:37478800-37481800 Weak transcription Fetal Muscle Leg muscle
35 chr19:37479200-37480800 Strong transcription Fetal Muscle Trunk muscle
36 chr19:37479200-37489000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
37 chr19:37479400-37480800 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
38 chr19:37479600-37480400 Weak transcription Primary T cells from cord blood blood
39 chr19:37479600-37480400 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr19:37479600-37480400 Weak transcription Fetal Lung lung
41 chr19:37479600-37480600 Weak transcription Pancreas Pancrea
42 chr19:37479600-37481000 Weak transcription Aorta Aorta
43 chr19:37479600-37481800 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr19:37479600-37481800 Weak transcription Rectal Smooth Muscle rectum
45 chr19:37479800-37481800 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr19:37479800-37481800 Weak transcription Brain Inferior Temporal Lobe brain
47 chr19:37479800-37489000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
48 chr19:37480000-37480400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr19:37480000-37481600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr19:37480000-37481800 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015