The 2.0 version of rSNPBase

Variant report

Variant rs16868675
Chromosome Location chr5:16481185-16481186
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16468000-16481800 Weak transcription Fetal Thymus thymus
2 chr5:16468200-16481600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr5:16468200-16482000 Weak transcription Primary T cells fromperipheralblood blood
4 chr5:16468200-16483200 Weak transcription A549 lung
5 chr5:16468200-16483400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr5:16468200-16484000 Weak transcription Small Intestine intestine
7 chr5:16468200-16485000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr5:16468200-16487400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr5:16468200-16489600 Weak transcription Brain Cingulate Gyrus brain
10 chr5:16468200-16490800 Weak transcription Right Ventricle heart
11 chr5:16468400-16493000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr5:16468800-16481200 Weak transcription HMEC breast
13 chr5:16469800-16489800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr5:16470000-16486800 Weak transcription Brain Angular Gyrus brain
15 chr5:16470000-16486800 Weak transcription Gastric stomach
16 chr5:16470000-16486800 Weak transcription Pancreas Pancrea
17 chr5:16470000-16486800 Weak transcription Psoas Muscle Psoas
18 chr5:16470000-16490200 Weak transcription Fetal Muscle Leg muscle
19 chr5:16470400-16489000 Weak transcription Fetal Brain Male brain
20 chr5:16472800-16483400 Strong transcription Skeletal Muscle Female skeletal muscle
21 chr5:16475400-16481600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr5:16475400-16483800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr5:16475400-16495200 Weak transcription Thymus Thymus
24 chr5:16475600-16481200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr5:16475800-16488800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr5:16476800-16481200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr5:16476800-16482600 Weak transcription Duodenum Mucosa Duodenum
28 chr5:16477600-16486800 Weak transcription Left Ventricle heart
29 chr5:16477600-16493000 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr5:16478200-16493400 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr5:16478600-16482600 Weak transcription Fetal Heart heart
32 chr5:16480400-16481200 Strong transcription Skeletal Muscle Male skeletal muscle
33 chr5:16480400-16481400 Strong transcription Liver Liver
34 chr5:16480600-16481800 Strong transcription Primary T cells from cord blood blood
35 chr5:16480600-16487400 Enhancers Fetal Intestine Small intestine
36 chr5:16480600-16491200 Enhancers Fetal Intestine Large intestine
37 chr5:16480800-16481600 Enhancers HSMM muscle
38 chr5:16480800-16481800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr5:16481000-16481200 Enhancers Brain Hippocampus Middle brain
40 chr5:16481000-16481400 Enhancers Muscle Satellite Cultured Cells --
41 chr5:16481000-16481400 Enhancers NHDF-Ad bronchial
42 chr5:16481000-16481600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr5:16481000-16481600 Enhancers HSMMtube muscle
44 chr5:16481000-16481600 Enhancers NHEK skin

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Last update: Aug 31, 2015