The 2.0 version of rSNPBase

Variant report

Variant rs73753375
Chromosome Location chr5:16443445-16443446
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16419200-16446000 Weak transcription Pancreas Pancrea
2 chr5:16428400-16464600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr5:16431000-16445600 Weak transcription Left Ventricle heart
4 chr5:16432600-16448600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr5:16432600-16454800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr5:16433000-16449200 Weak transcription H9 Cell Line embryonic stem cell
7 chr5:16435600-16450400 Weak transcription Fetal Heart heart
8 chr5:16435800-16445400 Weak transcription Right Ventricle heart
9 chr5:16435800-16445600 Weak transcription HSMMtube muscle
10 chr5:16437000-16445800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr5:16438000-16449200 Weak transcription Aorta Aorta
12 chr5:16438200-16449000 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr5:16438600-16448400 Weak transcription Fetal Intestine Small intestine
14 chr5:16439400-16447000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr5:16439600-16446200 Weak transcription Brain Substantia Nigra brain
16 chr5:16439600-16447000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr5:16439600-16448400 Weak transcription Brain Anterior Caudate brain
18 chr5:16439800-16447000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr5:16440000-16445800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr5:16440000-16445800 Weak transcription Liver Liver
21 chr5:16440200-16445600 Weak transcription Fetal Brain Female brain
22 chr5:16440200-16446000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:16440200-16448200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr5:16440400-16445800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr5:16440600-16445600 Weak transcription Primary T cells fromperipheralblood blood
26 chr5:16441000-16445800 Weak transcription Brain Cingulate Gyrus brain
27 chr5:16441400-16447000 Weak transcription Spleen Spleen
28 chr5:16441800-16446000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr5:16442000-16447200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr5:16442000-16449200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr5:16442200-16443800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr5:16442400-16445600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr5:16442400-16446000 Weak transcription Lung lung
34 chr5:16442400-16446800 Weak transcription Brain Germinal Matrix brain
35 chr5:16442400-16447000 Weak transcription Primary T cells from cord blood blood
36 chr5:16442400-16449200 Weak transcription Psoas Muscle Psoas
37 chr5:16442600-16445800 Weak transcription Primary B cells from cord blood blood
38 chr5:16442600-16446000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr5:16442800-16445000 Weak transcription Stomach Smooth Muscle stomach
40 chr5:16442800-16445800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr5:16443000-16445400 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr5:16443000-16445600 Weak transcription HSMM muscle
43 chr5:16443200-16445400 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr5:16443200-16445800 Weak transcription Fetal Muscle Trunk muscle
45 chr5:16443200-16449000 Weak transcription Fetal Lung lung
46 chr5:16443200-16449200 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr5:16443400-16445600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr5:16443400-16448200 Weak transcription A549 lung

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Last update: Aug 31, 2015