The 2.0 version of rSNPBase

Variant report

Variant rs73753065
Chromosome Location chr5:16484067-16484068
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16468200-16485000 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr5:16468200-16487400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr5:16468200-16489600 Weak transcription Brain Cingulate Gyrus brain
4 chr5:16468200-16490800 Weak transcription Right Ventricle heart
5 chr5:16468400-16493000 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr5:16469800-16489800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr5:16470000-16486800 Weak transcription Brain Angular Gyrus brain
8 chr5:16470000-16486800 Weak transcription Gastric stomach
9 chr5:16470000-16486800 Weak transcription Pancreas Pancrea
10 chr5:16470000-16486800 Weak transcription Psoas Muscle Psoas
11 chr5:16470000-16490200 Weak transcription Fetal Muscle Leg muscle
12 chr5:16470400-16489000 Weak transcription Fetal Brain Male brain
13 chr5:16475400-16495200 Weak transcription Thymus Thymus
14 chr5:16475800-16488800 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr5:16477600-16486800 Weak transcription Left Ventricle heart
16 chr5:16477600-16493000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr5:16478200-16493400 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr5:16480600-16487400 Enhancers Fetal Intestine Small intestine
19 chr5:16480600-16491200 Enhancers Fetal Intestine Large intestine
20 chr5:16481400-16486600 Weak transcription Liver Liver
21 chr5:16481600-16489600 Weak transcription HSMMtube muscle
22 chr5:16481800-16486800 Weak transcription Primary T cells from cord blood blood
23 chr5:16482600-16484400 Enhancers Duodenum Mucosa Duodenum
24 chr5:16482800-16494800 Enhancers Rectal Mucosa Donor 31 rectum
25 chr5:16483200-16484400 Enhancers A549 lung
26 chr5:16483200-16485000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:16483400-16484600 Enhancers Rectal Mucosa Donor 29 rectum
28 chr5:16483400-16484600 Genic enhancers Skeletal Muscle Female skeletal muscle
29 chr5:16483400-16484800 Enhancers NHEK skin
30 chr5:16483400-16485000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr5:16483400-16485000 Enhancers HMEC breast
32 chr5:16483400-16494600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr5:16483600-16484600 Enhancers Stomach Mucosa stomach
34 chr5:16483600-16486600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr5:16483800-16484800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:16483800-16485000 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr5:16484000-16484600 Enhancers Pancreatic Islets Pancreatic Islet
38 chr5:16484000-16485200 Enhancers Fetal Heart heart
39 chr5:16484000-16485200 Enhancers Small Intestine intestine

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Last update: Aug 31, 2015