Variant report
| Variant | rs16899113 |
|---|---|
| Chromosome Location | chr5:16387186-16387187 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000173545 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:29)
| rs_ID | r2[population] |
|---|---|
| rs10452497 | 1.00[EUR][1000 genomes] |
| rs13170268 | 1.00[EUR][1000 genomes] |
| rs16868520 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs16868547 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs16868549 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs16868554 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs16868633 | 1.00[EUR][1000 genomes] |
| rs16868690 | 1.00[EUR][1000 genomes] |
| rs16868696 | 1.00[EUR][1000 genomes] |
| rs3849101 | 1.00[EUR][1000 genomes] |
| rs3860133 | 1.00[EUR][1000 genomes] |
| rs3901884 | 1.00[EUR][1000 genomes] |
| rs4608921 | 1.00[EUR][1000 genomes] |
| rs56284496 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs56719397 | 1.00[EUR][1000 genomes] |
| rs58029623 | 1.00[EUR][1000 genomes] |
| rs58526375 | 1.00[EUR][1000 genomes] |
| rs60656173 | 1.00[EUR][1000 genomes] |
| rs61156892 | 1.00[EUR][1000 genomes] |
| rs6877375 | 1.00[EUR][1000 genomes] |
| rs6880065 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73753046 | 1.00[EUR][1000 genomes] |
| rs73753309 | 1.00[EUR][1000 genomes] |
| rs73753319 | 0.82[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73753390 | 1.00[EUR][1000 genomes] |
| rs7710117 | 1.00[EUR][1000 genomes] |
| rs7724068 | 1.00[EUR][1000 genomes] |
| rs7725043 | 1.00[EUR][1000 genomes] |
| rs7726000 | 1.00[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
