Variant report
Variant | rs6880065 |
---|---|
Chromosome Location | chr5:16385083-16385084 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr5:16384811..16387205-chr5:16464267..16466164,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000173545 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10452497 | 1.00[EUR][1000 genomes] |
rs13170268 | 1.00[EUR][1000 genomes] |
rs16868520 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs16868547 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs16868549 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs16868554 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs16868633 | 1.00[EUR][1000 genomes] |
rs16868690 | 1.00[EUR][1000 genomes] |
rs16868696 | 1.00[EUR][1000 genomes] |
rs16899113 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs3849101 | 1.00[EUR][1000 genomes] |
rs3860133 | 1.00[EUR][1000 genomes] |
rs3901884 | 1.00[EUR][1000 genomes] |
rs3907091 | 1.00[MEX][hapmap] |
rs4608921 | 1.00[EUR][1000 genomes] |
rs56284496 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs56719397 | 1.00[EUR][1000 genomes] |
rs58029623 | 1.00[EUR][1000 genomes] |
rs58526375 | 1.00[EUR][1000 genomes] |
rs60656173 | 1.00[EUR][1000 genomes] |
rs61156892 | 1.00[EUR][1000 genomes] |
rs6877375 | 1.00[EUR][1000 genomes] |
rs73753046 | 1.00[EUR][1000 genomes] |
rs73753309 | 1.00[EUR][1000 genomes] |
rs73753319 | 0.82[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs73753390 | 1.00[EUR][1000 genomes] |
rs7710117 | 1.00[EUR][1000 genomes] |
rs7724068 | 1.00[EUR][1000 genomes] |
rs7725043 | 1.00[EUR][1000 genomes] |
rs7726000 | 1.00[EUR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:16385000-16385400 | Enhancers | Pancreas | Pancrea |