Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:57701561..57704503-chr1:57708716..57710719,2	K562	blood:
2	chr1:57697250..57700340-chr1:57700852..57704576,4	K562	blood:

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11800032	1.00[ASN][1000 genomes]
rs11801601	1.00[CEU][hapmap]
rs11807144	1.00[ASN][1000 genomes]
rs155306	1.00[MEX][hapmap]
rs169101	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs169102	1.00[EUR][1000 genomes]
rs17115424	1.00[ASN][1000 genomes]
rs17115441	1.00[TSI][hapmap]
rs17115445	1.00[TSI][hapmap]
rs183194	1.00[EUR][1000 genomes]
rs192393	1.00[MEX][hapmap]
rs197622	0.90[EUR][1000 genomes]
rs197623	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs197628	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs197630	1.00[EUR][1000 genomes]
rs267652	1.00[MEX][hapmap]
rs269052	1.00[MEX][hapmap]
rs269060	1.00[MEX][hapmap]
rs486804	1.00[MEX][hapmap]
rs523282	1.00[MEX][hapmap]
rs537760	0.95[YRI][hapmap]
rs539257	1.00[MEX][hapmap]
rs579188	1.00[MEX][hapmap]
rs59069448	1.00[ASN][1000 genomes]
rs59607912	1.00[ASN][1000 genomes]
rs59936138	1.00[ASN][1000 genomes]
rs60262534	1.00[ASN][1000 genomes]
rs60349301	1.00[ASN][1000 genomes]
rs61257570	1.00[ASN][1000 genomes]
rs6675017	1.00[ASN][1000 genomes]
rs72919287	1.00[ASN][1000 genomes]
rs72921356	1.00[ASN][1000 genomes]
rs72921369	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv461628	chr1:57463326-57816489	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv546305	chr1:57463326-57816489	Weak transcription Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:57702200-57707400	Weak transcription	Fetal Intestine Large	intestine
2	chr1:57702200-57711800	Weak transcription	Fetal Intestine Small	intestine

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