Variant report

Variant	rs16920107
Chromosome Location	chr9:104030659-104030660
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10819914	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10819917	0.82[CHD][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs10989444	0.82[CHB][hapmap];0.82[CHD][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs10989447	1.00[CEU][hapmap];0.82[CHB][hapmap];0.82[CHD][hapmap];0.97[GIH][hapmap];0.85[JPT][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10989449	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10989451	1.00[CEU][hapmap];0.94[GIH][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10989452	0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs10989453	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10989457	0.82[CHB][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs10989458	0.81[CHB][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs10989459	0.85[ASN][1000 genomes]
rs10989460	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12237444	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs1341764	1.00[CEU][hapmap];0.97[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1341765	0.82[CHB][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs1341766	0.85[ASN][1000 genomes]
rs1341767	1.00[CEU][hapmap];0.90[CHB][hapmap];0.87[CHD][hapmap];0.90[GIH][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16920106	1.00[CEU][hapmap];0.85[JPT][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1857028	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2771073	0.85[JPT][hapmap]
rs2987730	0.82[JPT][hapmap]
rs4742809	0.85[JPT][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:104027200-104031600	Weak transcription	HepG2	liver
2	chr9:104028000-104032000	Weak transcription	Fetal Brain Female	brain
3	chr9:104030600-104030800	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr9:104030600-104031600	Enhancers	Brain Cingulate Gyrus	brain
5	chr9:104030600-104032000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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