Variant report

Variant	rs10819917
Chromosome Location	chr9:104026839-104026840
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10819914	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs10989435	0.82[JPT][hapmap]
rs10989438	0.82[JPT][hapmap]
rs10989439	0.81[CHD][hapmap];0.82[JPT][hapmap]
rs10989441	0.82[JPT][hapmap]
rs10989444	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10989447	0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs10989451	0.86[CHD][hapmap];0.82[JPT][hapmap]
rs10989452	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10989453	0.95[ASN][1000 genomes]
rs10989457	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10989458	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10989459	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10989460	0.89[CHB][hapmap];0.82[JPT][hapmap]
rs12237444	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs12237965	1.00[CEU][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1341764	0.87[CHD][hapmap];0.82[JPT][hapmap]
rs1341765	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1341766	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1341767	0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs16920106	1.00[JPT][hapmap]
rs16920107	0.82[CHD][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs1857028	0.95[ASN][1000 genomes]
rs2052977	0.85[CEU][hapmap];0.82[JPT][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs411448	0.82[JPT][hapmap]
rs4147116	0.82[JPT][hapmap]
rs643697	0.82[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:104026800-104027200	Enhancers	HepG2	liver
2	chr9:104026800-104028000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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