Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10766416	1.00[ASN][1000 genomes]
rs10832842	1.00[ASN][1000 genomes]
rs12575678	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12577406	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17558336	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28609365	0.88[ASN][1000 genomes]
rs2878806	1.00[CHB][hapmap]
rs3858493	1.00[ASN][1000 genomes]
rs3858494	1.00[ASN][1000 genomes]
rs3858495	1.00[ASN][1000 genomes]
rs3858496	1.00[ASN][1000 genomes]
rs3858498	1.00[ASN][1000 genomes]
rs3901370	1.00[CHB][hapmap]
rs3928366	1.00[ASN][1000 genomes]
rs4141262	0.94[ASN][1000 genomes]
rs4757568	1.00[CHB][hapmap]
rs4757569	1.00[CHB][hapmap]
rs6416178	0.88[ASN][1000 genomes]
rs6486390	0.88[ASN][1000 genomes]
rs67265917	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7128599	0.88[ASN][1000 genomes]
rs73420003	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73420005	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7478812	0.88[ASN][1000 genomes]
rs7481960	0.86[ASN][1000 genomes]
rs7937727	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040065	chr11:17556031-17753467	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1044126	chr11:17557715-17730646	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv540953	chr11:17557715-17730646	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17699200-17704000	Weak transcription	HSMM	muscle

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