The 2.0 version of rSNPBase

Variant report

Variant rs16971382
Chromosome Location chr16:72931049-72931050
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72921800-72935200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr16:72922800-72947400 Weak transcription Gastric stomach
3 chr16:72923800-72937600 Weak transcription Placenta Amnion Placenta Amnion
4 chr16:72923800-72942000 Weak transcription Right Ventricle heart
5 chr16:72923800-72942600 Weak transcription A549 lung
6 chr16:72924000-72939400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr16:72924000-72942000 Weak transcription Spleen Spleen
8 chr16:72924000-72947800 Weak transcription Liver Liver
9 chr16:72924200-72939600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr16:72924400-72931600 Weak transcription Fetal Intestine Large intestine
11 chr16:72924600-72931200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr16:72925000-72942000 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr16:72925200-72932600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr16:72928400-72955800 Weak transcription Aorta Aorta
15 chr16:72928600-72937400 Weak transcription Placenta Placenta
16 chr16:72928600-72940400 Weak transcription Colon Smooth Muscle Colon
17 chr16:72928800-72937200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr16:72929000-72931200 Enhancers Fetal Muscle Trunk muscle
19 chr16:72929000-72937400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr16:72929000-72948000 Weak transcription Left Ventricle heart
21 chr16:72929200-72931600 Weak transcription Fetal Intestine Small intestine
22 chr16:72929200-72934200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr16:72929200-72934400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr16:72929200-72934400 Weak transcription Fetal Brain Male brain
25 chr16:72929200-72934400 Weak transcription Right Atrium heart
26 chr16:72929200-72935000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr16:72929200-72935600 Weak transcription Fetal Lung lung
28 chr16:72929200-72937000 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr16:72929200-72942000 Weak transcription Hela-S3 cervix
30 chr16:72929200-72942000 Weak transcription HSMMtube muscle
31 chr16:72929400-72935400 Weak transcription Stomach Smooth Muscle stomach
32 chr16:72929600-72934400 Weak transcription Lung lung
33 chr16:72929800-72931200 Enhancers Skeletal Muscle Female skeletal muscle
34 chr16:72929800-72931200 Enhancers HSMM muscle
35 chr16:72929800-72939600 Weak transcription Osteobl bone
36 chr16:72930000-72931200 Enhancers Psoas Muscle Psoas
37 chr16:72930000-72931400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr16:72930000-72932000 Genic enhancers HepG2 liver
39 chr16:72930000-72932400 Weak transcription Adipose Nuclei Adipose
40 chr16:72930200-72932600 Weak transcription Ovary ovary
41 chr16:72930200-72934800 Weak transcription Fetal Kidney kidney
42 chr16:72930200-72935600 Weak transcription Fetal Brain Female brain
43 chr16:72930400-72932200 Weak transcription Brain Substantia Nigra brain
44 chr16:72930400-72932200 Weak transcription HUVEC blood vessel
45 chr16:72930400-72936200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr16:72930400-72939600 Weak transcription NHLF lung
47 chr16:72930600-72931200 Enhancers Pancreas Pancrea
48 chr16:72930600-72931400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr16:72930600-72933200 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr16:72930600-72935000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015