Variant report

Variant	rs16971373
Chromosome Location	chr16:72926172-72926173
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:72925280..72927589-chr16:72929459..72931430,2	K562	blood:
2	chr16:72925703..72927324-chr16:72938418..72941034,2	K562	blood:

rs_ID	r²[population]
rs11861408	1.00[EUR][1000 genomes]
rs11863759	1.00[EUR][1000 genomes]
rs11865496	1.00[EUR][1000 genomes]
rs13329845	1.00[EUR][1000 genomes]
rs16971145	1.00[EUR][1000 genomes]
rs16971240	1.00[EUR][1000 genomes]
rs16971367	1.00[EUR][1000 genomes]
rs16971382	1.00[EUR][1000 genomes]
rs16971547	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs28530505	1.00[EUR][1000 genomes]
rs28693857	1.00[EUR][1000 genomes]
rs28847294	1.00[EUR][1000 genomes]
rs56804755	1.00[EUR][1000 genomes]
rs56991537	1.00[EUR][1000 genomes]
rs60176428	1.00[EUR][1000 genomes]
rs61235372	1.00[EUR][1000 genomes]
rs61655021	1.00[EUR][1000 genomes]
rs6499589	1.00[EUR][1000 genomes]
rs7193704	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7195234	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7197918	1.00[EUR][1000 genomes]
rs7201079	1.00[TSI][hapmap]
rs7202598	1.00[EUR][1000 genomes]
rs73584928	1.00[EUR][1000 genomes]
rs73584931	1.00[EUR][1000 genomes]
rs73584955	1.00[EUR][1000 genomes]
rs73590703	1.00[EUR][1000 genomes]
rs73590712	1.00[EUR][1000 genomes]
rs73590718	1.00[EUR][1000 genomes]
rs73590724	1.00[EUR][1000 genomes]
rs73590791	1.00[EUR][1000 genomes]
rs8043976	1.00[EUR][1000 genomes]
rs8051371	1.00[EUR][1000 genomes]
rs8061838	1.00[EUR][1000 genomes]
rs9889054	1.00[TSI][hapmap]
rs9929006	1.00[EUR][1000 genomes]
rs9933331	1.00[EUR][1000 genomes]
rs9933418	1.00[EUR][1000 genomes]
rs9935518	1.00[EUR][1000 genomes]
rs9938038	1.00[EUR][1000 genomes]

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:72912400-72927400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr16:72912400-72928200	Weak transcription	Small Intestine	intestine
3	chr16:72913000-72928200	Weak transcription	HMEC	breast
4	chr16:72913000-72928200	Weak transcription	NHDF-Ad	bronchial
5	chr16:72914400-72928000	Weak transcription	HUVEC	blood vessel
6	chr16:72918200-72928400	Weak transcription	Fetal Brain Female	brain
7	chr16:72918400-72927600	Weak transcription	Thymus	Thymus
8	chr16:72918600-72927600	Weak transcription	Brain Hippocampus Middle	brain
9	chr16:72918800-72927000	Weak transcription	Brain Angular Gyrus	brain
10	chr16:72918800-72928200	Weak transcription	Brain Cingulate Gyrus	brain
11	chr16:72919000-72930000	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr16:72919200-72928000	Weak transcription	Right Atrium	heart
13	chr16:72919800-72930000	Strong transcription	HepG2	liver
14	chr16:72920400-72927200	Weak transcription	Hela-S3	cervix
15	chr16:72920600-72928200	Weak transcription	NH-A	brain
16	chr16:72921800-72927200	Weak transcription	Fetal Brain Male	brain
17	chr16:72921800-72928200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr16:72921800-72928200	Weak transcription	Colon Smooth Muscle	Colon
19	chr16:72921800-72935200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr16:72922000-72928000	Weak transcription	Fetal Kidney	kidney
21	chr16:72922000-72928200	Weak transcription	Brain Germinal Matrix	brain
22	chr16:72922400-72928000	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr16:72922400-72930000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr16:72922600-72928200	Weak transcription	Esophagus	oesophagus
25	chr16:72922600-72930000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr16:72922800-72947400	Weak transcription	Gastric	stomach
27	chr16:72923600-72927000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr16:72923600-72928200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr16:72923800-72927800	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr16:72923800-72928200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr16:72923800-72928200	Weak transcription	Brain Anterior Caudate	brain
32	chr16:72923800-72928200	Weak transcription	Brain Substantia Nigra	brain
33	chr16:72923800-72928200	Weak transcription	Fetal Lung	lung
34	chr16:72923800-72928200	Weak transcription	Left Ventricle	heart
35	chr16:72923800-72930000	Weak transcription	Pancreas	Pancrea
36	chr16:72923800-72937600	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr16:72923800-72942000	Weak transcription	Right Ventricle	heart
38	chr16:72923800-72942600	Weak transcription	A549	lung
39	chr16:72924000-72926800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr16:72924000-72926800	Weak transcription	Aorta	Aorta
41	chr16:72924000-72926800	Weak transcription	Rectal Smooth Muscle	rectum
42	chr16:72924000-72927600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr16:72924000-72928000	Weak transcription	Osteobl	bone
44	chr16:72924000-72928200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr16:72924000-72928200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr16:72924000-72928200	Weak transcription	Adipose Nuclei	Adipose
47	chr16:72924000-72928200	Weak transcription	Fetal Muscle Trunk	muscle
48	chr16:72924000-72928200	Weak transcription	Fetal Muscle Leg	muscle
49	chr16:72924000-72928200	Weak transcription	Ovary	ovary
50	chr16:72924000-72928200	Weak transcription	Sigmoid Colon	Sigmoid Colon

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