Variant report

Variant	rs60176428
Chromosome Location	chr16:72934528-72934529
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:72930173..72932440-chr16:72933074..72936390,4	MCF-7	breast:
2	chr16:72934259..72937653-chr16:72940388..72943039,3	MCF-7	breast:
3	chr16:72932823..72935468-chr16:72960660..72963281,2	MCF-7	breast:

rs_ID	r²[population]
rs11861408	1.00[EUR][1000 genomes]
rs11865496	1.00[EUR][1000 genomes]
rs13329845	1.00[EUR][1000 genomes]
rs16971240	1.00[EUR][1000 genomes]
rs16971367	1.00[EUR][1000 genomes]
rs16971373	1.00[EUR][1000 genomes]
rs16971382	1.00[EUR][1000 genomes]
rs16971547	1.00[EUR][1000 genomes]
rs28530505	1.00[EUR][1000 genomes]
rs28693857	1.00[EUR][1000 genomes]
rs28847294	1.00[EUR][1000 genomes]
rs56804755	1.00[EUR][1000 genomes]
rs56991537	1.00[EUR][1000 genomes]
rs61235372	1.00[EUR][1000 genomes]
rs61655021	1.00[EUR][1000 genomes]
rs6499589	1.00[EUR][1000 genomes]
rs7193704	1.00[EUR][1000 genomes]
rs7195234	1.00[EUR][1000 genomes]
rs7197918	1.00[EUR][1000 genomes]
rs7202598	1.00[EUR][1000 genomes]
rs73584928	1.00[EUR][1000 genomes]
rs73584931	1.00[EUR][1000 genomes]
rs73584955	1.00[EUR][1000 genomes]
rs73590703	1.00[EUR][1000 genomes]
rs73590712	1.00[EUR][1000 genomes]
rs73590718	1.00[EUR][1000 genomes]
rs73590724	1.00[EUR][1000 genomes]
rs73590791	1.00[EUR][1000 genomes]
rs8051371	1.00[EUR][1000 genomes]
rs9929006	1.00[EUR][1000 genomes]
rs9933331	1.00[EUR][1000 genomes]
rs9933418	1.00[EUR][1000 genomes]
rs9935518	1.00[EUR][1000 genomes]

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:72921800-72935200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr16:72922800-72947400	Weak transcription	Gastric	stomach
3	chr16:72923800-72937600	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr16:72923800-72942000	Weak transcription	Right Ventricle	heart
5	chr16:72923800-72942600	Weak transcription	A549	lung
6	chr16:72924000-72939400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr16:72924000-72942000	Weak transcription	Spleen	Spleen
8	chr16:72924000-72947800	Weak transcription	Liver	Liver
9	chr16:72924200-72939600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr16:72925000-72942000	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr16:72928400-72955800	Weak transcription	Aorta	Aorta
12	chr16:72928600-72937400	Weak transcription	Placenta	Placenta
13	chr16:72928600-72940400	Weak transcription	Colon Smooth Muscle	Colon
14	chr16:72928800-72937200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr16:72929000-72937400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr16:72929000-72948000	Weak transcription	Left Ventricle	heart
17	chr16:72929200-72935000	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr16:72929200-72935600	Weak transcription	Fetal Lung	lung
19	chr16:72929200-72937000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr16:72929200-72942000	Weak transcription	Hela-S3	cervix
21	chr16:72929200-72942000	Weak transcription	HSMMtube	muscle
22	chr16:72929400-72935400	Weak transcription	Stomach Smooth Muscle	stomach
23	chr16:72929800-72939600	Weak transcription	Osteobl	bone
24	chr16:72930200-72934800	Weak transcription	Fetal Kidney	kidney
25	chr16:72930200-72935600	Weak transcription	Fetal Brain Female	brain
26	chr16:72930400-72936200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr16:72930400-72939600	Weak transcription	NHLF	lung
28	chr16:72930600-72935000	Weak transcription	Muscle Satellite Cultured Cells	--
29	chr16:72930600-72939600	Weak transcription	Skeletal Muscle Male	skeletal muscle
30	chr16:72931000-72935000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr16:72931000-72936000	Weak transcription	Brain Anterior Caudate	brain
32	chr16:72931000-72945000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr16:72931000-72955400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr16:72931200-72934600	Weak transcription	Fetal Muscle Trunk	muscle
35	chr16:72931200-72937000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr16:72931200-72947600	Weak transcription	Pancreas	Pancrea
37	chr16:72931400-72937000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr16:72931400-72939400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr16:72931600-72934600	Weak transcription	Fetal Stomach	stomach
40	chr16:72932600-72964600	Weak transcription	Fetal Intestine Large	intestine
41	chr16:72933000-72939800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr16:72933200-72942000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr16:72933800-72937400	Strong transcription	HepG2	liver
44	chr16:72934200-72934600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr16:72934200-72935000	Strong transcription	HSMM	muscle
46	chr16:72934200-72936000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr16:72934400-72934600	Enhancers	Fetal Brain Male	brain
48	chr16:72934400-72934600	Enhancers	Lung	lung
49	chr16:72934400-72934600	Enhancers	Right Atrium	heart
50	chr16:72934400-72934800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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