The 2.0 version of rSNPBase

Variant report

Variant rs28530505
Chromosome Location chr16:72906800-72906801
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72883200-72909200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr16:72883400-72908400 Weak transcription Fetal Intestine Large intestine
3 chr16:72883400-72918800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr16:72883600-72912200 Weak transcription Ovary ovary
5 chr16:72883800-72908800 Weak transcription Hela-S3 cervix
6 chr16:72884200-72911600 Weak transcription Gastric stomach
7 chr16:72885200-72909000 Weak transcription Lung lung
8 chr16:72889200-72908800 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr16:72891400-72908400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr16:72893000-72909600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr16:72893200-72911400 Weak transcription Stomach Mucosa stomach
12 chr16:72893400-72909000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr16:72893600-72909000 Weak transcription Colon Smooth Muscle Colon
14 chr16:72893600-72909400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr16:72893800-72907000 Weak transcription Fetal Kidney kidney
16 chr16:72893800-72909200 Weak transcription Rectal Smooth Muscle rectum
17 chr16:72894200-72906800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr16:72894200-72906800 Weak transcription HSMMtube muscle
19 chr16:72894400-72909200 Weak transcription Fetal Lung lung
20 chr16:72895000-72906800 Weak transcription NHLF lung
21 chr16:72895200-72908200 Weak transcription Esophagus oesophagus
22 chr16:72895200-72918000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr16:72895400-72908400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr16:72895400-72909200 Weak transcription Psoas Muscle Psoas
25 chr16:72895400-72909200 Weak transcription Right Atrium heart
26 chr16:72896000-72908400 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr16:72896200-72908600 Weak transcription Placenta Amnion Placenta Amnion
28 chr16:72896600-72909200 Weak transcription Duodenum Mucosa Duodenum
29 chr16:72897400-72909000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr16:72899600-72909200 Weak transcription A549 lung
31 chr16:72899800-72907000 Weak transcription Muscle Satellite Cultured Cells --
32 chr16:72899800-72907800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr16:72899800-72909600 Weak transcription Liver Liver
34 chr16:72900000-72908400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr16:72900000-72908800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr16:72900000-72908800 Weak transcription Left Ventricle heart
37 chr16:72900000-72909000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr16:72900000-72910600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr16:72900200-72906800 Weak transcription Fetal Muscle Leg muscle
40 chr16:72900400-72912000 Weak transcription Stomach Smooth Muscle stomach
41 chr16:72901200-72908800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr16:72901200-72909000 Weak transcription Aorta Aorta
43 chr16:72901200-72909200 Weak transcription Brain Hippocampus Middle brain
44 chr16:72901400-72907800 Weak transcription Fetal Intestine Small intestine
45 chr16:72901600-72909200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr16:72902400-72908800 Weak transcription Osteobl bone
47 chr16:72902800-72908400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr16:72902800-72911000 Weak transcription Fetal Stomach stomach
49 chr16:72902800-72911000 Weak transcription Right Ventricle heart
50 chr16:72903600-72908600 Weak transcription HepG2 liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015