Variant report

Variant rs16978558
Chromosome Location chr18:43980076-43980077
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43964400-43980800 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr18:43967800-43981000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr18:43968800-43981400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr18:43969200-43985200 Weak transcription Right Atrium heart
5 chr18:43973600-43991400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr18:43974200-43990400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr18:43975200-43983400 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr18:43976600-43981000 Enhancers Fetal Muscle Trunk muscle
9 chr18:43977000-43983200 Enhancers Fetal Muscle Leg muscle
10 chr18:43977200-43983000 Weak transcription Psoas Muscle Psoas
11 chr18:43978000-43980600 Enhancers Right Ventricle heart
12 chr18:43978200-43981000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr18:43978200-43982800 Weak transcription Fetal Lung lung
14 chr18:43978400-43980200 Enhancers Spleen Spleen
15 chr18:43978400-43981000 Weak transcription Lung lung
16 chr18:43978400-43982800 Weak transcription H9 Cell Line embryonic stem cell
17 chr18:43978600-43985200 Weak transcription Esophagus oesophagus
18 chr18:43978800-43982600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr18:43978800-43982800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr18:43978800-43986200 Weak transcription Fetal Stomach stomach
21 chr18:43979200-43980400 Enhancers Fetal Brain Male brain
22 chr18:43979600-43980800 Enhancers Fetal Heart heart
23 chr18:43979600-43981400 Enhancers Fetal Thymus thymus
24 chr18:43979800-43981200 Enhancers GM12878-XiMat blood
25 chr18:43979800-43986200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr18:43980000-43980200 Enhancers Brain Germinal Matrix brain
27 chr18:43980000-43980200 Enhancers Stomach Smooth Muscle stomach
28 chr18:43980000-43980600 Enhancers Brain Inferior Temporal Lobe brain
29 chr18:43980000-43980600 Enhancers Left Ventricle heart
30 chr18:43980000-43981200 Enhancers Fetal Brain Female brain

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