The 2.0 version of rSNPBase

Variant report

Variant rs17029577
Chromosome Location chr4:100760855-100760856
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:100745400-100765200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr4:100747000-100765400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr4:100752200-100765200 Strong transcription Primary B cells from peripheral blood blood
4 chr4:100753400-100765000 Strong transcription Primary monocytes fromperipheralblood blood
5 chr4:100754200-100761000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr4:100754600-100764400 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr4:100755000-100766400 Strong transcription Primary B cells from cord blood blood
8 chr4:100755200-100766400 Weak transcription Aorta Aorta
9 chr4:100755400-100776000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr4:100755600-100766400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr4:100755800-100764400 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr4:100756200-100763600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr4:100756400-100761400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr4:100756400-100763400 Strong transcription Primary T helper cells PMA-I stimulated --
15 chr4:100756400-100765200 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr4:100756400-100765600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr4:100756600-100761000 Strong transcription Primary T cells fromperipheralblood blood
18 chr4:100756600-100761400 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr4:100756600-100763400 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr4:100756600-100764000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr4:100756600-100765000 Strong transcription GM12878-XiMat blood
22 chr4:100758400-100762400 Weak transcription Esophagus oesophagus
23 chr4:100758600-100762400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr4:100758600-100765400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr4:100758600-100766200 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr4:100759000-100763000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr4:100759200-100761400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr4:100760000-100765200 Weak transcription Spleen Spleen
29 chr4:100760200-100766200 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr4:100760200-100777000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr4:100760200-100777200 Weak transcription Fetal Thymus thymus
32 chr4:100760400-100762200 Weak transcription Primary hematopoietic stem cells blood
33 chr4:100760400-100762400 Weak transcription Primary T cells from cord blood blood
34 chr4:100760400-100762400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr4:100760400-100766200 Weak transcription HMEC breast
36 chr4:100760600-100767200 Strong transcription NHEK skin
37 chr4:100760800-100761000 Enhancers Placenta Amnion Placenta Amnion
38 chr4:100760800-100761800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015