The 2.0 version of rSNPBase

Variant report

Variant rs60994806
Chromosome Location chr4:100779394-100779395
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:100761000-100801200 Weak transcription Placenta Amnion Placenta Amnion
2 chr4:100768400-100799000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr4:100775800-100780800 Weak transcription Esophagus oesophagus
4 chr4:100776800-100779400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr4:100777000-100782600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr4:100777600-100779400 Enhancers Fetal Lung lung
7 chr4:100777600-100780800 Weak transcription Spleen Spleen
8 chr4:100777600-100787400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr4:100777600-100800800 Weak transcription Thymus Thymus
10 chr4:100777800-100779400 Strong transcription NHEK skin
11 chr4:100777800-100780000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr4:100777800-100780400 Weak transcription GM12878-XiMat blood
13 chr4:100777800-100780800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr4:100777800-100799200 Weak transcription Fetal Thymus thymus
15 chr4:100777800-100801000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr4:100778000-100780400 Weak transcription Primary T cells from cord blood blood
17 chr4:100778000-100780600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr4:100778000-100782200 Weak transcription HMEC breast
19 chr4:100778000-100782400 Weak transcription Primary T cells fromperipheralblood blood
20 chr4:100778000-100782800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr4:100778000-100786000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr4:100778000-100792000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr4:100778000-100798600 Weak transcription Duodenum Mucosa Duodenum
24 chr4:100778000-100800200 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr4:100778200-100779400 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr4:100778200-100780400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr4:100778200-100782600 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr4:100778200-100798200 Weak transcription Placenta Placenta
29 chr4:100778400-100780000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr4:100778400-100789600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr4:100778400-100800600 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr4:100778600-100779400 Enhancers Primary hematopoietic stem cells blood
33 chr4:100778600-100779400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr4:100778600-100779800 Genic enhancers Primary B cells from cord blood blood
35 chr4:100778600-100780200 Enhancers Primary monocytes fromperipheralblood blood
36 chr4:100778600-100786000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr4:100778800-100779400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr4:100779000-100779400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
39 chr4:100779000-100779800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
40 chr4:100779000-100780400 Strong transcription Primary B cells from peripheral blood blood
41 chr4:100779200-100779600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr4:100779200-100782000 Strong transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015