Variant report

Variant	rs17029681
Chromosome Location	chr4:100907576-100907577
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:100903254..100904966-chr4:100906407..100908065,3	K562	blood:
2	chr4:100902237..100905358-chr4:100905474..100909216,4	K562	blood:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10001730	0.90[ASN][1000 genomes]
rs10002820	0.87[ASN][1000 genomes]
rs10014424	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs10016741	0.92[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs10018937	0.87[ASN][1000 genomes]
rs10461176	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12641552	0.95[AMR][1000 genomes]
rs12643730	0.85[AMR][1000 genomes]
rs1365494	0.93[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs17029542	1.00[JPT][hapmap]
rs17029577	1.00[JPT][hapmap]
rs17029592	0.83[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap]
rs17029594	0.83[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap]
rs17029606	0.85[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.86[ASN][1000 genomes]
rs17029641	1.00[CEU][hapmap];0.93[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.91[ASN][1000 genomes]
rs17029667	0.93[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs17029696	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.98[ASN][1000 genomes]
rs17029698	0.98[ASN][1000 genomes]
rs17029717	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2282587	0.86[ASN][1000 genomes]
rs2298734	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28375729	0.93[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs28445732	0.87[ASN][1000 genomes]
rs28497573	0.91[ASN][1000 genomes]
rs28553972	0.94[ASN][1000 genomes]
rs28561548	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];1.00[ASN][1000 genomes]
rs28566137	0.93[ASN][1000 genomes]
rs28604943	0.93[ASN][1000 genomes]
rs28635099	0.94[ASN][1000 genomes]
rs2866175	0.93[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs28709045	0.98[ASN][1000 genomes]
rs28824275	0.93[ASN][1000 genomes]
rs28893880	1.00[CEU][hapmap];0.93[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.93[ASN][1000 genomes]
rs3737485	1.00[JPT][hapmap]
rs3775510	0.86[ASN][1000 genomes]
rs4463078	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs57238114	0.86[ASN][1000 genomes]
rs57862852	0.86[ASN][1000 genomes]
rs59439986	1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs59768994	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60203069	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60994806	0.86[ASN][1000 genomes]
rs61229555	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62305048	0.90[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100907400-100908600	Enhancers	GM12878-XiMat	blood

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