The 2.0 version of rSNPBase

Variant report

Variant rs17072608
Chromosome Location chr6:143756326-143756327
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143706600-143757400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:143726800-143765000 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr6:143733200-143770400 Weak transcription A549 lung
4 chr6:143742400-143757000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr6:143742400-143757400 Weak transcription Pancreas Pancrea
6 chr6:143742400-143770800 Weak transcription Spleen Spleen
7 chr6:143742800-143770200 Weak transcription Psoas Muscle Psoas
8 chr6:143744400-143770800 Weak transcription Left Ventricle heart
9 chr6:143744800-143760800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr6:143745800-143770600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr6:143746600-143759400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:143747400-143762800 Strong transcription K562 blood
13 chr6:143747400-143770600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr6:143747800-143758800 Weak transcription Primary B cells from peripheral blood blood
15 chr6:143748000-143759000 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr6:143748000-143770400 Weak transcription Primary monocytes fromperipheralblood blood
17 chr6:143748200-143757400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:143748200-143770600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr6:143748400-143757400 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr6:143748400-143757600 Weak transcription Fetal Lung lung
21 chr6:143748400-143758200 Weak transcription NH-A brain
22 chr6:143748400-143758400 Weak transcription Primary B cells from cord blood blood
23 chr6:143748400-143762600 Weak transcription Muscle Satellite Cultured Cells --
24 chr6:143748400-143762600 Weak transcription Osteobl bone
25 chr6:143748400-143770400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr6:143748400-143770600 Weak transcription Fetal Kidney kidney
27 chr6:143748400-143770600 Weak transcription NHDF-Ad bronchial
28 chr6:143748400-143770600 Weak transcription NHLF lung
29 chr6:143749200-143760200 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr6:143749400-143762800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:143749400-143770400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr6:143749600-143757400 Weak transcription Lung lung
33 chr6:143749600-143770800 Weak transcription Esophagus oesophagus
34 chr6:143749800-143757400 Weak transcription Duodenum Mucosa Duodenum
35 chr6:143749800-143770400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr6:143750000-143757400 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr6:143750200-143757400 Weak transcription Fetal Thymus thymus
38 chr6:143750800-143762800 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr6:143750800-143770200 Weak transcription Colon Smooth Muscle Colon
40 chr6:143750800-143770200 Weak transcription Thymus Thymus
41 chr6:143751000-143770800 Weak transcription HSMMtube muscle
42 chr6:143751400-143759600 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr6:143751400-143761000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr6:143751600-143757400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr6:143751600-143757400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr6:143751600-143757800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr6:143751600-143770200 Weak transcription Fetal Intestine Small intestine
48 chr6:143751600-143770400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr6:143751600-143770800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr6:143751800-143757400 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015