Variant report

Variant	rs17076499
Chromosome Location	chr6:147283823-147283824
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10499242	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10499244	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10499245	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11966340	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11966941	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12660458	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12661319	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12661587	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12662397	0.97[ASN][1000 genomes]
rs12663509	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12664925	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12665457	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12665594	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12665649	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17076429	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs17076435	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17076442	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17076444	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17076452	0.87[ASN][1000 genomes]
rs17076474	0.97[ASN][1000 genomes]
rs17076505	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17076507	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17076510	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17076512	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs17076522	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17076531	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17076533	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17076538	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17076540	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1852797	0.97[ASN][1000 genomes]
rs58553228	0.87[ASN][1000 genomes]
rs6651008	1.00[AFR][1000 genomes]
rs6910157	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6915087	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147282400-147284000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:147282600-147284000	Enhancers	NHEK	skin
3	chr6:147283400-147288800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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