Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:71547040..71549249-chr1:71549673..71553160,6	K562	blood:

Variant related genes	Relation type
ENSG00000229956	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10128001	1.00[CEU][hapmap];0.91[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10493483	0.96[AMR][1000 genomes]
rs10518356	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11556475	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13376594	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17090802	0.80[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17090925	0.89[AMR][1000 genomes]
rs17090932	1.00[CEU][hapmap];0.96[AMR][1000 genomes]
rs17091001	0.96[AMR][1000 genomes]
rs17091015	0.93[AMR][1000 genomes]
rs17091024	0.96[AMR][1000 genomes]
rs17091028	0.93[AMR][1000 genomes]
rs41287936	0.94[EUR][1000 genomes]
rs5671	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs5673	0.90[EUR][1000 genomes]
rs56752457	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs5676	0.90[EUR][1000 genomes]
rs5691	0.90[EUR][1000 genomes]
rs58163483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58281678	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs58293304	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs59834169	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs60078028	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs726352	0.96[AMR][1000 genomes]
rs74087222	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs74090259	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7531741	0.92[EUR][1000 genomes]
rs7552415	1.00[CEU][hapmap];0.94[EUR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71547600-71551400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr1:71547600-71551600	Weak transcription	HSMMtube	muscle
3	chr1:71547600-71551600	Weak transcription	NHDF-Ad	bronchial
4	chr1:71547600-71551800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr1:71547600-71555200	Weak transcription	Lung	lung
6	chr1:71547600-71555800	Weak transcription	NHLF	lung
7	chr1:71547800-71551200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr1:71547800-71551400	Weak transcription	NHEK	skin
9	chr1:71547800-71551600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr1:71547800-71551600	Weak transcription	Fetal Intestine Small	intestine
11	chr1:71547800-71551600	Weak transcription	HSMM	muscle
12	chr1:71547800-71551800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:71547800-71551800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr1:71547800-71551800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr1:71547800-71554600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr1:71549600-71555200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr1:71550800-71553400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr1:71551000-71551400	Genic enhancers	Spleen	Spleen
19	chr1:71551000-71552000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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