Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10450645	1.00[EUR][1000 genomes]
rs17105525	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1940757	1.00[EUR][1000 genomes]
rs1940784	1.00[EUR][1000 genomes]
rs4332487	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4427534	1.00[EUR][1000 genomes]
rs4531437	1.00[EUR][1000 genomes]
rs4754145	1.00[EUR][1000 genomes]
rs4755139	1.00[EUR][1000 genomes]
rs482942	1.00[CHB][hapmap]
rs494766	1.00[EUR][1000 genomes]
rs497271	1.00[EUR][1000 genomes]
rs501777	1.00[EUR][1000 genomes]
rs501889	1.00[EUR][1000 genomes]
rs516531	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs527993	1.00[EUR][1000 genomes]
rs529861	1.00[EUR][1000 genomes]
rs535189	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs579770	1.00[EUR][1000 genomes]
rs58379581	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs586279	1.00[EUR][1000 genomes]
rs591957	1.00[CHB][hapmap]
rs601181	1.00[EUR][1000 genomes]
rs606871	1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[EUR][1000 genomes]
rs608643	1.00[CHB][hapmap]
rs629793	1.00[EUR][1000 genomes]
rs645748	1.00[EUR][1000 genomes]
rs646242	1.00[EUR][1000 genomes]
rs660564	1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[EUR][1000 genomes]
rs661099	1.00[EUR][1000 genomes]
rs664549	1.00[EUR][1000 genomes]
rs669266	1.00[EUR][1000 genomes]
rs671671	1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs682320	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048381	chr11:105945117-106561574	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	esv2754854	chr11:106092790-106245790	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1054471	chr11:106168484-106427713	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106183200-106187000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr11:106183200-106189200	Weak transcription	NHDF-Ad	bronchial

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