The 2.0 version of rSNPBase

Variant report

Variant rs17112669
Chromosome Location chr1:56171887-56171888
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56166400-56182200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:56167600-56174000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:56167800-56179000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:56167800-56181000 Weak transcription HSMM muscle
5 chr1:56168000-56180600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:56169800-56173200 Weak transcription Muscle Satellite Cultured Cells --
7 chr1:56169800-56177800 Weak transcription Placenta Placenta
8 chr1:56170200-56173000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:56170200-56173600 Weak transcription Ovary ovary
10 chr1:56170200-56173800 Weak transcription Fetal Lung lung
11 chr1:56170200-56177800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:56170200-56181000 Weak transcription Fetal Muscle Leg muscle
13 chr1:56170400-56172600 Weak transcription NHLF lung
14 chr1:56170400-56172800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:56170800-56172000 Weak transcription NHDF-Ad bronchial
16 chr1:56171600-56172200 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr1:56171800-56172200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:56171800-56172400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:56171800-56174200 Enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015