The 2.0 version of rSNPBase

Variant report

Variant rs72671428
Chromosome Location chr1:56188493-56188494
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56180000-56190600 Enhancers Muscle Satellite Cultured Cells --
2 chr1:56185200-56190400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:56185200-56191800 Weak transcription Aorta Aorta
4 chr1:56186400-56188600 Weak transcription HMEC breast
5 chr1:56186400-56188600 Weak transcription NH-A brain
6 chr1:56186400-56188600 Weak transcription NHLF lung
7 chr1:56186400-56190200 Weak transcription Hela-S3 cervix
8 chr1:56186400-56190600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:56186400-56192200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:56186400-56207600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:56186600-56188600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:56186600-56188600 Weak transcription Osteobl bone
13 chr1:56186600-56188800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:56186600-56189400 Weak transcription HSMMtube muscle
15 chr1:56186600-56192200 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:56186800-56188600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:56186800-56188600 Weak transcription NHDF-Ad bronchial
18 chr1:56186800-56189400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:56186800-56192400 Weak transcription Fetal Stomach stomach
20 chr1:56187200-56189000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:56187600-56191200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:56187800-56188600 Weak transcription Ovary ovary
23 chr1:56187800-56190600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:56187800-56192000 Weak transcription Fetal Muscle Leg muscle
25 chr1:56187800-56192400 Enhancers HSMM muscle

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Last update: Aug 31, 2015