Variant report

Variant rs17151445
Chromosome Location chr7:78399947-78399948
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:78396600-78400600 Active TSS Fetal Brain Female brain
2 chr7:78397400-78400600 Active TSS HUES48 Cell Line embryonic stem cell
3 chr7:78397400-78400800 Active TSS Fetal Brain Male brain
4 chr7:78397600-78401000 Active TSS Brain Inferior Temporal Lobe brain
5 chr7:78397800-78400800 Active TSS Brain Angular Gyrus brain
6 chr7:78397800-78400800 Active TSS Brain Anterior Caudate brain
7 chr7:78397800-78400800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
8 chr7:78397800-78401000 Active TSS H1 Cell Line embryonic stem cell
9 chr7:78398000-78400600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr7:78398000-78400600 Active TSS Brain Cingulate Gyrus brain
11 chr7:78398000-78400600 Active TSS Brain Hippocampus Middle brain
12 chr7:78398000-78400800 Active TSS H9 Cell Line embryonic stem cell
13 chr7:78398000-78400800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
14 chr7:78398000-78401000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr7:78398200-78400600 Active TSS Right Ventricle heart
16 chr7:78398200-78400800 Active TSS HUES64 Cell Line embryonic stem cell
17 chr7:78398200-78400800 Active TSS iPS-15b Cell Line embryonic stem cell
18 chr7:78398200-78400800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
19 chr7:78398200-78400800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
20 chr7:78398200-78400800 Active TSS Fetal Muscle Trunk muscle
21 chr7:78398200-78400800 Active TSS Right Atrium heart
22 chr7:78398400-78400400 Active TSS Left Ventricle heart
23 chr7:78398400-78400400 Active TSS Rectal Smooth Muscle rectum
24 chr7:78398400-78400600 Active TSS Psoas Muscle Psoas
25 chr7:78398400-78400800 Active TSS iPS-18 Cell Line embryonic stem cell
26 chr7:78398400-78400800 Active TSS Duodenum Smooth Muscle Duodenum
27 chr7:78398400-78400800 Active TSS Fetal Heart heart
28 chr7:78398400-78400800 Active TSS Fetal Kidney kidney
29 chr7:78398400-78400800 Active TSS Skeletal Muscle Male skeletal muscle
30 chr7:78398400-78401000 Active TSS ES-I3 Cell Line embryonic stem cell
31 chr7:78398400-78401000 Active TSS ES-WA7 Cell Line embryonic stem cell
32 chr7:78398400-78401000 Active TSS Brain Substantia Nigra brain
33 chr7:78398400-78401000 Active TSS Pancreatic Islets Pancreatic Islet
34 chr7:78398600-78400000 Active TSS Rectal Mucosa Donor 29 rectum
35 chr7:78398600-78400200 Active TSS Fetal Adrenal Gland Adrenal Gland
36 chr7:78398600-78400600 Active TSS Aorta Aorta
37 chr7:78398600-78400600 Bivalent/Poised TSS Fetal Intestine Large intestine
38 chr7:78398600-78400800 Active TSS HUES6 Cell Line embryonic stem cell
39 chr7:78398800-78400000 Enhancers Primary B cells from peripheral blood blood
40 chr7:78398800-78400000 Enhancers Liver Liver
41 chr7:78398800-78400400 Active TSS Pancreas Pancrea
42 chr7:78398800-78400600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr7:78398800-78400800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr7:78399000-78400000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr7:78399000-78400000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr7:78399000-78400400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
47 chr7:78399000-78400400 Weak transcription Lung lung
48 chr7:78399000-78401000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
49 chr7:78399200-78400000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
50 chr7:78399200-78400000 Enhancers Fetal Lung lung

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