The 2.0 version of rSNPBase

Variant report

Variant rs17302075
Chromosome Location chr1:180859817-180859818
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180805800-180881000 Weak transcription Aorta Aorta
2 chr1:180812200-180867000 Weak transcription Ovary ovary
3 chr1:180822000-180862800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:180822800-180862800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:180823600-180860000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:180823800-180862600 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr1:180824000-180867600 Weak transcription Fetal Muscle Leg muscle
8 chr1:180824000-180880800 Weak transcription Right Ventricle heart
9 chr1:180828600-180867800 Weak transcription HSMM muscle
10 chr1:180830000-180867600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:180832800-180861800 Weak transcription HepG2 liver
12 chr1:180835400-180862800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:180835800-180861600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:180835800-180870400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:180841000-180867800 Weak transcription Lung lung
16 chr1:180843600-180862800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr1:180844200-180872200 Weak transcription Esophagus oesophagus
18 chr1:180844400-180867400 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr1:180845800-180869000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:180847400-180875400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:180849400-180867200 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:180851000-180867000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:180851400-180867400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:180851400-180867600 Weak transcription Fetal Heart heart
25 chr1:180851600-180860200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:180851600-180862600 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr1:180851600-180864200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:180851600-180867600 Weak transcription Brain Germinal Matrix brain
29 chr1:180851600-180867800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:180851800-180861600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:180851800-180867400 Weak transcription Fetal Intestine Small intestine
32 chr1:180852000-180870400 Weak transcription A549 lung
33 chr1:180853600-180862800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:180853600-180867200 Weak transcription Adipose Nuclei Adipose
35 chr1:180853800-180862800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:180853800-180867800 Weak transcription Fetal Stomach stomach
37 chr1:180854000-180866400 Weak transcription Primary B cells from cord blood blood
38 chr1:180854400-180862000 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr1:180854400-180862000 Weak transcription K562 blood
40 chr1:180854400-180862200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr1:180854400-180866800 Weak transcription Left Ventricle heart
42 chr1:180854800-180866800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:180855000-180862800 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:180857000-180862800 Weak transcription Primary hematopoietic stem cells blood
45 chr1:180857200-180867400 Weak transcription Duodenum Mucosa Duodenum
46 chr1:180857400-180860400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:180857400-180860800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr1:180857400-180863000 Weak transcription Primary T cells from cord blood blood
49 chr1:180857600-180869600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:180858000-180862800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015